Evidence map›Paper›PMID 33466430›Full record

ArticleAnimals : an open access journal from MDPI2021

Accuracy of Imputation of Microsatellite Markers from a 50K SNP Chip in Spanish Assaf Sheep.

Héctor Marina, Aroa Suarez-Vega, Rocío Pelayo, Beatriz Gutiérrez-Gil, Antonio Reverter, Cristina Esteban-Blanco, Juan José Arranz

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Animals : an open access journal from MDPI, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Héctor MarinaDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.ORCID 0000-0001-9226-2902
Aroa Suarez-VegaDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.
Rocío PelayoDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.ORCID 0000-0002-9827-1292
Beatriz Gutiérrez-GilDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.ORCID 0000-0001-7990-5723
Antonio ReverterCSIRO Agriculture and Food, Queensland Bioscience Precinct, 306 Carmody Rd., St Lucia, Brisbane, QLD 4067, Australia.ORCID 0000-0002-4681-9404
Cristina Esteban-BlancoDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.ORCID 0000-0002-2425-000X
Juan José ArranzDepartment of Animal Production, Faculty of Veterinary Medicine, University of León, Campus de Vegazana s/n, 24071 León, Spain.ORCID 0000-0001-9058-131X

Funding

Ministerio de Ciencia e Innovación (Spain RTI2018-093535-B-I00
6 · The paper itself

Abstract

Transitioning from traditional to new genotyping technologies requires the development of bridging methodologies to avoid extra genotyping costs. This study aims to identify the optimum number of single nucleotide polymorphisms (SNPs) necessary to accurately impute microsatellite markers to develop a low-density SNP chip for parentage verification in the Assaf sheep breed. The accuracy of microsatellite marker imputation was assessed with three metrics: genotype concordance (C), genotype dosage (length r

Indexed as

marker imputationmicrosatellitespedigree verificationsheepSNPs

Identifiers

PMID33466430
PMCPMC7824810

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.