Evidence map›Paper›PMID 33463006›Full record

ArticleMolecular oncology2021

A novel prognostic mRNA/miRNA signature for esophageal cancer and its immune landscape in cancer progression.

Yue Zhao, Li Xu, Xinyu Wang, Shuai Niu, Hezhong Chen, ChunGuang Li

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 58 citations in OpenAlex.

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  14. Identification of enhancer RNATranslational cancer research · 2023
    Article
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  16. MDiscover oncology · 2023
    Article
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  18. LncRNAJournal of thoracic disease · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yue ZhaoDepartment of Thoracic Surgery, Changhai Hospital, Second Military Medical University, Shanghai, China.ORCID 0000-0001-5690-8761
Li XuDepartment of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medical, Tongji University, Shanghai, China.
Xinyu WangDepartment of Thoracic Surgery, Changhai Hospital, Second Military Medical University, Shanghai, China.
Shuai NiuDepartment of Vascular Surgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Hezhong ChenDepartment of Thoracic Surgery, Changhai Hospital, Second Military Medical University, Shanghai, China.
ChunGuang LiDepartment of Thoracic Surgery, Changhai Hospital, Second Military Medical University, Shanghai, China.
Second Military Medical University · CNTongji University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mounting evidence shows that MicroRNAs (miRNAs) and their target genes are aberrantly expressed in many cancers and are linked to tumor occurrence and progression, especially in esophageal cancer (EC). This study purposed to explore new biomarkers related to the prognosis of EC and to uncover their potential mechanisms in promoting tumor progression. We identified 162 differentially expressed miRNAs and 4555 differentially expressed mRNAs in EC. Then, a risk model involving three miRNAs (miR-4521, miR-3682-3p, and miR-1269a) was designed to predict prognosis in EC patients. Furthermore, 7 target genes (Rho GTPase-activating protein 24, Chromobox 3, Contactin-associated protein 2, ELOVL fatty acid elongase 5, LIF receptor subunit alpha, transmembrane protein 44, and transmembrane protein 67) were selected for Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses to reveal their potential mechanisms in promoting EC progression. After a series of correlation analyses, miRNA target genes were found to be significantly positively or negatively associated with immune infiltration, tumor microenvironment, cancer stemness properties, and tumor mutation burden at different degrees in EC. To further elucidate the role of miRNA signature in cancer progression, we performed a pan-cancer analysis to determine whether these genes exert similar effects on other tumors. Interestingly, the miRNA target genes altered expression on tumor immunity; however, pan-cancer progression was the same as that of EC. Thus, we explored the immune landscape of the miRNA signature and its target genes in EC and pan-cancer. These findings demonstrated the versatility and effectiveness of our model in various cancers and provided a new direction for cancer management.

Indexed as

Biomarkers, TumorEsophageal NeoplasmsGene Expression Regulation, NeoplasticGene OntologyHumansMicroRNAsPrognosisRNA, MessengerSurvival RateTumor MicroenvironmentBiomarkers, TumorMicroRNAsMIRN1269 microRNA, humanMIRN4521 microRNA, humanRNA, Messengerdrug sensitivityimmune subtypemiRNAsprognosistumor microenvironmenttumor mutation burden

Identifiers

PMID33463006
PMCPMC8024720
OpenAlexW3125828127

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.