ArticleMicrobial ecology2021
Plant Compartments and Developmental Stages Modulate the Balance between Niche-Based and Neutral Processes in Soybean Microbiome.
Article in Microbial ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed.
- Article
- Convergent Bacterial but Divergent Fungal Communities in the Tobacco Rhizosphere Under Intensive Management on Contrasting Soils.Microorganisms · 2026Article
- Microbial terroir in winegrowing: revisiting the role of microbial biogeography in terroir expression.Applied and environmental microbiology · 2026Review
- Host-Dependent Endophytes as a Resilient Biological Reservoir: Niche-Specific Expansion and Holobiont Reassembly in Grapevine.Microorganisms · 2026Article
- Linking Host Provenance, Microbial Assembly, and Environmental Legacy Effects in the Root-Associated Microbiome ofMicroorganisms · 2026Article
- Ecological and functional roles of plant microbiomes in environmental detoxification.Frontiers in microbiology · 2026Review
- Host Developmental Stage and Vegetation Type Govern Root EcM Fungal Assembly in Temperate Forests.Journal of fungi (Basel, Switzerland) · 2025Article
- Life on a leaf: the epiphyte to pathogen continuum and interplay in the phyllosphere.BMC biology · 2024Review
- Endophytic Microorganisms in Tomato Roots, Changes in the Structure and Function of the Community at Different Growing Stages.Microorganisms · 2024Article
- The response of microbiome assembly within different niches across four stages to the cultivation of glyphosate-tolerant and conventional soybean varieties.Frontiers in microbiology · 2024Article
- Sugarcane mosaic virus reduced bacterial diversity and network complexity in the maize root endosphere.mSystems · 2023Article
- Attribution of dispersal limitation can better explain the assembly patterns of plant microbiota.Frontiers in plant science · 2023Article
- Whole-plant microbiome profiling reveals a novel geminivirus associated with soybean stay-green disease.Plant biotechnology journal · 2022Article
- The response of wheat and its microbiome to contemporary and historical water stress in a field experiment.ISME communications · 2022Article
- Cytokinin-microbiome interactions regulate developmental functions.Environmental microbiome · 2022Article
- Inferring the Contribution of Microbial Taxa and Organic Matter Molecular Formulas to Ecological Assembly.Frontiers in microbiology · 2022Article
- TheFrontiers in microbiology · 2021Article
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Authors and funding
5 authors.
Funding
Abstract
Understanding the dynamics of plant-associated microbial communities within agriculture is well documented. However, the ecological processes that assemble the plant microbiome are not well understood. This study elucidates the relative dominance of assembly processes across plant compartments (root, stem, and leaves) and developmental stages (emergence, growth, flowering, and maturation). Bacterial community composition and assembly processes were assessed using 16S rRNA gene amplicon sequencing. Null models that couple phylogenetic community composition and species distribution models were used to evaluate ecological assembly processes of bacterial communities. All models highlighted that the balance between the assembly process was modulated by compartments and developmental stages. Dispersal limitation dominated amongst the epiphytic communities and at the maturation stage. Homogeneous selection dominated assembly across plant compartments and development stages. Overall, both sets of models were mostly in agreement in predicting the prevailing assembly processes. Our results show, for the first time, that even though niche-based processes dominate in the plant environment, the relative influence of dispersal limitation in community assembly is important.
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