Evidence map›Paper›PMID 33459939›Full record

ArticleGlycoconjugate journal2021

The structure and role of lactone intermediates in linkage-specific sialic acid derivatization reactions.

Tamas Pongracz, Aswin Verhoeven, Manfred Wuhrer, Noortje de Haan

Open access · hybridAbstract read
In one paragraph

Article in Glycoconjugate journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Analysis ofACS omega · 2025
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  5. Review
  6. High-Throughput Glycomic Methods.Chemical reviews · 2022
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Tamas PongraczCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333ZA, Leiden, The Netherlands.ORCID 0000-0002-8089-4352
Aswin VerhoevenCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333ZA, Leiden, The Netherlands.ORCID 0000-0003-0373-9372
Manfred WuhrerCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333ZA, Leiden, The Netherlands.ORCID 0000-0002-0814-4995
Noortje de HaanCenter for Proteomics and Metabolomics, Leiden University Medical Center, 2333ZA, Leiden, The Netherlands. n.de_haan@lumc.nl.ORCID 0000-0001-7026-6750
Leiden University Medical Center · NLUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sialic acids occur ubiquitously throughout vertebrate glycomes and often endcap glycans in either α2,3- or α2,6-linkage with diverse biological roles. Linkage-specific sialic acid characterization is increasingly performed by mass spectrometry, aided by differential sialic acid derivatization to discriminate between linkage isomers. Typically, during the first step of such derivatization reactions, in the presence of a carboxyl group activator and a catalyst, α2,3-linked sialic acids condense with the subterminal monosaccharides to form lactones, while α2,6-linked sialic acids form amide or ester derivatives. In a second step, the lactones are converted into amide derivatives. Notably, the structure and role of the lactone intermediates in the reported reactions remained ambiguous, leaving it unclear to which extent the amidation of α2,3-linked sialic acids depended on direct aminolysis of the lactone, rather than lactone hydrolysis and subsequent amidation. In this report, we used mass spectrometry to unravel the role of the lactone intermediate in the amidation of α2,3-linked sialic acids by applying controlled reaction conditions on simple and complex glycan standards. The results unambiguously show that in common sialic acid derivatization protocols prior lactone formation is a prerequisite for the efficient, linkage-specific amidation of α2,3-linked sialic acids, which proceeds predominantly via direct aminolysis. Furthermore, nuclear magnetic resonance spectroscopy confirmed that exclusively the C2 lactone intermediate is formed on a sialyllactose standard. These insights allow a more rationalized method development for linkage-specific sialic derivatization in the future.

Indexed as

CatalysisLactonesLactoseMagnetic Resonance SpectroscopyMolecular StructurePolysaccharidesSialic AcidsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationLactonesLactoseN-acetylneuraminoyllactoseneuramin lactitolPolysaccharidesSialic AcidsGlycomicsLactoneLinkage isomersMass spectrometryNuclear magnetic resonanceSialic acid

Identifiers

PMID33459939
PMCPMC8052245
OpenAlexW3122658169

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.