Evidence map›Paper›PMID 33459685›Full record

ArticleJournal of X-ray science and technology2021

COVID-19 diagnosis from chest X-ray images using transfer learning: Enhanced performance by debiasing dataloader.

Çağín Polat, Onur Karaman, Ceren Karaman, Güney Korkmaz, Mehmet Can Balcı, Sevim Ercan Kelek

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Article in Journal of X-ray science and technology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

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0cells of the map it votes in
9citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Çağín PolatNotrino Research, ODTÜ Teknokent, Ankara, Turkey.
Onur KaramanDepartment of Medical Imaging Techniques, Akdeniz University, Vocational School of Health Services, Antalya, Turkey.
Ceren KaramanDepartment of Electricity and Energy, Akdeniz University, Vocational School of Technical Sciences, Antalya, Turkey.
Güney KorkmazNotrino Research, ODTÜ Teknokent, Ankara, Turkey.
Mehmet Can BalcıNotrino Research, ODTÜ Teknokent, Ankara, Turkey.
Sevim Ercan KelekDepartment of Medical Laboratory Techniques, Akdeniz University, Vocational School of Health Services, Antalya, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChest X-ray imaging has been proved as a powerful diagnostic method to detect and diagnose COVID-19 cases due to its easy accessibility, lower cost and rapid imaging time.

objectiveThis study aims to improve efficacy of screening COVID-19 infected patients using chest X-ray images with the help of a developed deep convolutional neural network model (CNN) entitled nCoV-NET.

methodsTo train and to evaluate the performance of the developed model, three datasets were collected from resources of "ChestX-ray14", "COVID-19 image data collection", and "Chest X-ray collection from Indiana University," respectively. Overall, 299 COVID-19 pneumonia cases and 1,522 non-COVID 19 cases are involved in this study. To overcome the probable bias due to the unbalanced cases in two classes of the datasets, ResNet, DenseNet, and VGG architectures were re-trained in the fine-tuning stage of the process to distinguish COVID-19 classes using a transfer learning method. Lastly, the optimized final nCoV-NET model was applied to the testing dataset to verify the performance of the proposed model.

resultsAlthough the performance parameters of all re-trained architectures were determined close to each other, the final nCOV-NET model optimized by using DenseNet-161 architecture in the transfer learning stage exhibits the highest performance for classification of COVID-19 cases with the accuracy of 97.1 %. The Activation Mapping method was used to create activation maps that highlights the crucial areas of the radiograph to improve causality and intelligibility.

conclusionThis study demonstrated that the proposed CNN model called nCoV-NET can be utilized for reliably detecting COVID-19 cases using chest X-ray images to accelerate the triaging and save critical time for disease control as well as assisting the radiologist to validate their initial diagnosis.

Indexed as

Deep LearningAlgorithmsCOVID-19Early DiagnosisHumansNeural Networks, ComputerPneumoniaRadiography, ThoracicReproducibility of ResultsSARS-CoV-2Tomography, X-Ray Computedchest X-ray imagesconvolutional neural network (CNN)Coronavirus (COVID-19) infectiondeep learningtransfer learning

Identifiers

PMID33459685
PMCPMC7990426

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.