Evidence map›Paper›PMID 33454019›Full record

ArticleThe Journal of biological chemistry2020

Identification and biochemical characterization of Asp t 36, a new fungal allergen from Aspergillus terreus.

Bijoya Karmakar, Bodhisattwa Saha, Kuladip Jana, Swati Gupta Bhattacharya

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Bijoya KarmakarDivision of Plant Biology, Bose Institute (Main Campus), Kolkata, India.
Bodhisattwa SahaCSIR-Institute of Genomics and Integrative Biology, New Delhi, India. Electronic address: bodhisattwasaha@gmail.com.
Kuladip JanaDivision of Molecular Medicines, Bose Institute (Centenary Building), Kolkata, India.
Swati Gupta BhattacharyaDivision of Plant Biology, Bose Institute (Main Campus), Kolkata, India. Electronic address: swati@jcbose.ac.in.
Bose Institute · INInstitute of Genomics and Integrative Biology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus terreus is an allergenic fungus, in addition to causing infections in both humans and plants. However, the allergens in this fungus are still unknown, limiting the development of diagnostic and therapeutic strategies. We used a proteomic approach to search for allergens, identifying 16 allergens based on two-dimensional immunoblotting with A. terreus susceptible patient sera. We further characterized triose-phosphate isomerase (Asp t 36), one of the dominant IgE (IgE)-reactive proteins. The gene was cloned and expressed in Escherichia coli. Phylogenetic analysis showed Asp t 36 to be highly conserved with close similarity to the triose-phosphate isomerase protein sequence from Dermatophagoides farinae, an allergenic dust mite. We identified four immunodominant epitopes using synthetic peptides, and mapped them on a homology-based model of the tertiary structure of Asp t 36. Among these, two were found to create a continuous surface patch on the 3D structure, rendering it an IgE-binding hotspot. Biophysical analysis indicated that Asp t 36 shows similar secondary structure content and temperature sensitivity with other reported triose-phosphate isomerase allergens. In vivo studies using a murine model displayed that the recombinant Asp t 36 was able to stimulate airway inflammation, as demonstrated by an influx of eosinophils, goblet cell hyperplasia, elevated serum Igs, and induction of Th2 cytokines. Collectively, our results reveal the immunogenic property of Asp t 36, a major allergen from A. terreus, and define a new fungal allergen more broadly. This allergen could serve as a potent candidate for investigating component resolved diagnosis and immunotherapy.

Indexed as

AllergensAmino Acid SequenceAnimalsAspergillusElectrophoresis, Gel, Two-DimensionalEpitopesFungal ProteinsHypersensitivityImmunoglobulin EMaleMiceMice, Inbred BALB CPhylogenyProtein Structure, TertiaryProteomePyroglyphidaeAllergensEpitopesFungal ProteinsImmunoglobulin EProteomeRecombinant ProteinsTriose-Phosphate Isomeraseairway inflammationallergenAspergillus terreuschromatographycircular dichroismcircular dichroism (CD)epitope mappingimmunoglobulin E (IgE)immunoglobulin G (IgG)proteomicstriose-phosphate isomerase

Identifiers

PMID33454019
PMCPMC7762961
OpenAlexW3093928356

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.