Evidence map›Paper›PMID 33453264›Full record

ArticleDevelopmental biology2021

ETS factors are required but not sufficient for specific patterns of enhancer activity in different endothelial subtypes.

Alice Neal, Svanhild Nornes, Pakavarin Louphrasitthiphol, Natalia Sacilotto, Mark D Preston, Lucija Fleisinger, Sophie Payne, Sarah De Val

Open access · hybridAbstract read
In one paragraph

Article in Developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. EndothelialResearch square · 2024
    Article
  4. Transcription factors regulating vasculogenesis and angiogenesis.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Review
  5. Review
  6. Review
  7. Article
  8. Stroke-associated intergenic variants modulate a human FOXF2 transcriptional enhancer.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. The Expression of Proto-OncogeneInternational journal of molecular sciences · 2022
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Alice NealDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford, OX1 3PT, United Kingdom. Electronic address: alice.neal@dpag.ox.ac.uk.
Svanhild NornesDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford, OX1 3PT, United Kingdom.
Pakavarin LouphrasitthipholLudwig Institute for Cancer Research Ltd, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7DQ, United Kingdom.
Natalia SacilottoLudwig Institute for Cancer Research Ltd, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7DQ, United Kingdom.
Mark D PrestonNational Institute for Biological Standards and Control, Blanche Lane, South Mimms, Potters Bar, EN6 3QG, United Kingdom.
Lucija FleisingerDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford, OX1 3PT, United Kingdom.
Sophie PayneDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford, OX1 3PT, United Kingdom; Ludwig Institute for Cancer Research Ltd, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7DQ, United Kingdom.
Sarah De ValDepartment of Physiology, Anatomy and Genetics, University of Oxford, Oxford, OX1 3PT, United Kingdom; Ludwig Institute for Cancer Research Ltd, Nuffield Department of Medicine, University of Oxford, Oxford, OX3 7DQ, United Kingdom. Electronic address: sarah.deval@dpag.ox.ac.uk.
University of Oxford · GBNational Institute for Biological Standards and Control · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L02038/1British Heart Foundation FS/17/35/32929British Heart Foundation PG/16/34/32135British Heart Foundation PG/18/62/33967Medical Research Council MR/J007765/1
6 · The paper itself

Abstract

Correct vascular differentiation requires distinct patterns of gene expression in different subtypes of endothelial cells. Members of the ETS transcription factor family are essential for the transcriptional activation of arterial and angiogenesis-specific gene regulatory elements, leading to the hypothesis that they play lineage-defining roles in arterial and angiogenic differentiation directly downstream of VEGFA signalling. However, an alternative explanation is that ETS binding at enhancers and promoters is a general requirement for activation of many endothelial genes regardless of expression pattern, with subtype-specificity provided by additional factors. Here we use analysis of Ephb4 and Coup-TFII (Nr2f2) vein-specific enhancers to demonstrate that ETS factors are equally essential for vein, arterial and angiogenic-specific enhancer activity patterns. Further, we show that ETS factor binding at these vein-specific enhancers is enriched by VEGFA signalling, similar to that seen at arterial and angiogenic enhancers. However, while arterial and angiogenic enhancers can be activated by VEGFA in vivo, the Ephb4 and Coup-TFII venous enhancers are not, suggesting that the specificity of VEGFA-induced arterial and angiogenic enhancer activity occurs via non-ETS transcription factors. These results support a model in which ETS factors are not the primary regulators of specific patterns of gene expression in different endothelial subtypes.

Indexed as

AnimalsArteriesCell DifferentiationEndothelial CellsEndotheliumEnhancer Elements, GeneticFemaleGene ExpressionGene Expression Regulation, DevelopmentalMaleMiceMice, Inbred C57BLMice, TransgenicNeovascularization, PhysiologicProto-Oncogene Proteins c-etsSignal TransductionProto-Oncogene Proteins c-etsTranscription FactorsVascular Endothelial Growth Factor AZebrafish ProteinsArterio-venous differentiationArterio-venous specificationArteryBlood vesselsEndothelial cellEnhancerERGETSTranscriptionVein

Identifiers

PMID33453264
PMCPMC8026812
OpenAlexW3118418390

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.