Evidence map›Paper›PMID 33453050›Full record

ArticleMolecular diagnosis & therapy2021

High-Speed Quenching Probe-Polymerase Chain Reaction Assay for the Rapid Detection of Carbapenemase-Producing Gene Using GENECUBE: A Fully Automatic Gene Analyzer.

Qi Lu, Takashi Okanda, Yu Yang, Hazim O Khalifa, Anwarul Haque, Hiromu Takemura, Tetsuya Matsumoto

Abstract read
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In one paragraph

Article in Molecular diagnosis & therapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 65% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Qi LuDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan.
Takashi OkandaDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan. takashi.okanda@marianna-u.ac.jp.ORCID http://orcid.org/0000-0002-5640-5811
Yu YangDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan.
Hazim O KhalifaDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan.
Anwarul HaqueDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan.
Hiromu TakemuraDepartment of Microbiology, St. Marianna University School of Medicine, Kawasaki, Japan.
Tetsuya MatsumotoDepartment of Infectious Diseases, International University of Health and Welfare, Narita, Japan.
International University of Health and Welfare · JPSt. Marianna University School of Medicine · JPChildren's Hospital of Chongqing Medical University · CNKafrelsheikh University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe prevalence of carbapenemase-producing organisms (CPOs) globally poses a public health threat; however, detecting carbapenemases is a challenge because of their variety.

methodsGENECUBE, a fully automated gene analyzer, detects a target gene in a short time and simultaneously detects its single nucleotide polymorphism. We used this property to develop for the first time a rapid assay for detecting CPOs from cultured bacteria using GENECUBE. The original primer-probe sets were used to detect bla

resultsThe sensitivity, specificity, and positive and negative predictions of the GENECUBE assay were 100%. This assay detected carbapenemase single-producers and carbapenemase co-producers with 100% accuracy. The time required for detects of four types of carbapenemase at one run was about 30 min, but it took about 1 h to detect all five types. In addition, this assay performed the rapid detection and classification of bla

conclusionsThe GENECUBE assay is a promising tool for controlling the spread of CPOs and helping to select accurate and rapid antibiotic therapies.

Indexed as

Bacterial Proteinsbeta-LactamasesDrug Resistance, BacterialEnterobacteriaceaeHumansMicrobial Sensitivity TestsPolymerase Chain ReactionBacterial Proteinsbeta-Lactamasescarbapenemase

Identifiers

PMID33453050
OpenAlexW3122691985

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.