Evidence map›Paper›PMID 33452461›Full record

ReviewOncogene2021

Supercharging BRD4 with NUT in carcinoma.

Kyle P Eagen, Christopher A French

Open access · greenAbstract readReview
In one paragraph

Review in Oncogene, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Shared PRAME epitopes are T-cell targets in NUT carcinoma.Journal for immunotherapy of cancer · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Molecular Characterization of NUT Carcinoma: A Report from the NUT Carcinoma Registry.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  13. Targeting lysine acetylation readers and writers.Nature reviews. Drug discovery · 2025
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Life science alliance · 2024
    Article
  20. [Research Progress on Pathogenesis and Treatment of NUT Carcinoma].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Kyle P EagenDepartment of Biochemistry and Molecular Genetics, Simpson Querrey Institute for Epigenetics, Robert H. Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA. eagen@northwestern.edu.ORCID http://orcid.org/0000-0002-2610-8664
Christopher A FrenchDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA. Cfrench@bwh.harvard.edu.ORCID http://orcid.org/0000-0002-7434-4987
Brigham and Women's Hospital · USNorthwestern University · US

Funding

Pathogenesis of NUT-Rearranged CarcinomaR01CA124633 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI Christopher A French · 2007 to 2026
$7.0M
Biochemical Basis of Chromatin Folding and Chromosome CondensationDP5OD024587 · OD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI EAGEN, KYLE PATRICK · 2017 to 2021
$2.0M
NCI NIH HHS R01 CA124633NIH HHS DP5 OD024587
6 · The paper itself

Abstract

NUT carcinoma (NC) is an extremely aggressive squamous cancer with no effective therapy. NC is driven, most commonly, by the BRD4-NUT fusion oncoprotein. BRD4-NUT combines the chromatin-binding bromo- and extraterminal domain-containing (BET) protein, BRD4, with an unstructured, poorly understood protein, NUT, which recruits and activates the histone acetyltransferase p300. Recruitment of p300 to chromatin by BRD4 is believed to lead to the formation of hyperacetylated nuclear foci, as seen by immunofluorescence. BRD4-NUT nuclear foci correspond with massive contiguous regions of chromatin co-enriched with BRD4-NUT, p300, and acetylated histones, termed "megadomains" (MD). Megadomains stretch for as long as 2 MB. Proteomics has defined a BRD4-NUT chromatin complex in which members that associate with BRD4 also exist as rare NUT-fusion partners. This suggests that the common pathogenic denominator is the presence of both BRD4 and NUT, and that the function of BRD4-NUT may mimic that of wild-type BRD4. If so, then MDs may function as massive super-enhancers, activating transcription in a BET-dependent manner. Common targets of MDs across multiple NCs and tissues are three stem cell-related transcription factors frequently implicated in cancer: MYC, SOX2, and TP63. Recently, MDs were found to form a novel nuclear sub-compartment, called subcompartment M (subM), where MD-MD interactions occur both intra- and inter-chromosomally. Included in subM are MYC, SOX2, and TP63. Here we explore the possibility that if MDs are simply large super-enhancers, subM may exist in other cell systems, with broad implications for how 3D organization of the genome may function in gene regulation and maintenance of cell identity. Finally, we discuss how our knowledge of BRD4-NUT function has been leveraged for the therapeutic development of first-in-class BET inhibitors and other targeted strategies.

Indexed as

Bromodomain Containing ProteinsCarcinomaCell Cycle ProteinsCell Line, TumorChromatinHumansNeoplasm ProteinsNuclear Proteinsp300-CBP-Associated Factorp300-CBP Transcription FactorsProto-Oncogene Proteins c-mycSOXB1 Transcription FactorsTranscription FactorsTumor Suppressor ProteinsBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsChromatinMYC protein, humanNeoplasm ProteinsNuclear ProteinsNUTM1 protein, humanp300-CBP-Associated Factorp300-CBP Transcription FactorsProto-Oncogene Proteins c-mycSOX2 protein, humanSOXB1 Transcription FactorsTP63 protein, humanTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID33452461
PMCPMC7914217
OpenAlexW3125377737

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.