Evidence map›Paper›PMID 33452433›Full record

ArticleNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2021

Prediction of short-term antidepressant response using probabilistic graphical models with replication across multiple drugs and treatment settings.

Arjun P Athreya, Tanja Brückl, Elisabeth B Binder, A John Rush, Joanna Biernacka, Mark A Frye, Drew Neavin, Michelle Skime, Ditlev Monrad, Ravishankar K Iyer and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 2 pooled it
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 2 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Pooled it
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  9. Predicting treatment outcome in depression: an introduction into current concepts and challenges.European archives of psychiatry and clinical neuroscience · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 4 countries.

Arjun P AthreyaDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, MN, USA.
Tanja BrücklDepartment of Translational Research Psychiatry, Max Planck Institute of Psychiatry, Munich, Germany.
Elisabeth B BinderDepartment of Translational Research Psychiatry, Max Planck Institute of Psychiatry, Munich, Germany.ORCID http://orcid.org/0000-0001-7088-6618
A John RushDuke-National University of Singapore, Singapore, Singapore.ORCID http://orcid.org/0000-0003-2004-2382
Joanna BiernackaDepartment of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0001-9350-4440
Mark A FryeDepartment of Psychiatry and Psychology, Mayo Clinic, Rochester, MN, USA.
Drew NeavinGarvan Institute of Medical Research, Sydney, NSW, Australia.
Michelle SkimeDepartment of Psychiatry and Psychology, Mayo Clinic, Rochester, MN, USA.
Ditlev MonradDepartment of Statistics, University of Illinois at Urbana-Champaign, Champaign, IL, USA.
Ravishankar K IyerDepartment of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Champaign, IL, USA.
Taryn MayesDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Madhukar TrivediDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-2983-1110
Rickey E CarterDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, USA.ORCID http://orcid.org/0000-0002-0818-273X
Liewei WangDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, MN, USA.
Richard M WeinshilboumDepartment of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, MN, USA.
Paul E CroarkinDepartment of Psychiatry and Psychology, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0001-6843-6503
William V BoboDepartment of Psychiatry and Psychology, Mayo Clinic, Jacksonville, FL, USA. Bobo.william@mayo.edu.
Mayo Clinic · USMax Planck Institute of Psychiatry · DEMayo Clinic in Florida · USThe University of Texas Southwestern Medical Center · USUniversity of Illinois Urbana-Champaign · USGarvan Institute of Medical Research · AUJacksonville College · USTexas Tech University · US

Funding

Pharmacogenetics of Phase II Drug Metabolizing EnzymesU19GM061388 · NIGMS · MAYO CLINIC ROCHESTER · PI WANG, LIEWEI, WEINSHILBOUM, RICHARD M. · 2010 to 2014
$15.8M
Metabolomics Network for Drug Response PhenotypeRC2GM092729 · NIGMS · DUKE UNIVERSITY · PI KADDURAH-DAOUK, RIMA F · 2009 to 2010
$4.5M
Glutamatergic and GABAergic Biomarkers in rTMS for Adolescent DepressionR01MH113700 · NIMH · MAYO CLINIC ROCHESTER · PI CROARKIN, PAUL E · 2017 to 2021
$2.5M
Predoctoral Training Program in Molecular PharmacologyT32GM072474 · NIGMS · MAYO CLINIC ROCHESTER · PI KARNITZ, LARRY M · 2005 to 2020
$2.4M
Metabolomics Network for Drug Response PhenotypeR24GM078233 · NIGMS · DUKE UNIVERSITY · PI KADDURAH-DAOUK, RIMA F · 2007 to 2010
$2.1M
NIGMS NIH HHS R24 GM078233NIGMS NIH HHS RC2 GM092729NIGMS NIH HHS T32 GM072474NIGMS NIH HHS U19 GM061388NIMH NIH HHS R01 MH113700
6 · The paper itself

Abstract

Heterogeneity in the clinical presentation of major depressive disorder and response to antidepressants limits clinicians' ability to accurately predict a specific patient's eventual response to therapy. Validated depressive symptom profiles may be an important tool for identifying poor outcomes early in the course of treatment. To derive these symptom profiles, we first examined data from 947 depressed subjects treated with selective serotonin reuptake inhibitors (SSRIs) to delineate the heterogeneity of antidepressant response using probabilistic graphical models (PGMs). We then used unsupervised machine learning to identify specific depressive symptoms and thresholds of improvement that were predictive of antidepressant response by 4 weeks for a patient to achieve remission, response, or nonresponse by 8 weeks. Four depressive symptoms (depressed mood, guilt feelings and delusion, work and activities and psychic anxiety) and specific thresholds of change in each at 4 weeks predicted eventual outcome at 8 weeks to SSRI therapy with an average accuracy of 77% (p = 5.5E-08). The same four symptoms and prognostic thresholds derived from patients treated with SSRIs correctly predicted outcomes in 72% (p = 1.25E-05) of 1996 patients treated with other antidepressants in both inpatient and outpatient settings in independent publicly-available datasets. These predictive accuracies were higher than the accuracy of 53% for predicting SSRI response achieved using approaches that (i) incorporated only baseline clinical and sociodemographic factors, or (ii) used 4-week nonresponse status to predict likely outcomes at 8 weeks. The present findings suggest that PGMs providing interpretable predictions have the potential to enhance clinical treatment of depression and reduce the time burden associated with trials of ineffective antidepressants. Prospective trials examining this approach are forthcoming.

Indexed as

Major Depressive DisorderPharmaceutical PreparationsAntidepressive AgentsHumansProspective StudiesSelective Serotonin Reuptake InhibitorsAntidepressive AgentsPharmaceutical PreparationsSelective Serotonin Reuptake Inhibitors

Identifiers

PMID33452433
PMCPMC8134509
OpenAlexW3121610863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.