Evidence map›Paper›PMID 33452380›Full record

ArticleScientific reports2021

Mycobacterium tuberculosis Rv3160c is a TetR-like transcriptional repressor that regulates expression of the putative oxygenase Rv3161c.

Hasan Tükenmez, Souvik Sarkar, Saber Anoosheh, Anastasiia Kruchanova, Isabel Edström, Gregory A Harrison, Christina L Stallings, Fredrik Almqvist, Christer Larsson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Hasan TükenmezDepartment of Chemistry, Umeå University, 90187, Umeå, Sweden. hasan.tukenmez@umu.se.
Souvik SarkarDepartment of Chemistry, Umeå University, 90187, Umeå, Sweden.
Saber AnooshehDepartment of Chemistry, Umeå University, 90187, Umeå, Sweden.
Anastasiia KruchanovaDepartment of Molecular Biology, Umeå University, 90187, Umeå, Sweden.
Isabel EdströmDepartment of Molecular Biology, Umeå University, 90187, Umeå, Sweden.
Gregory A HarrisonDepartment of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Christina L StallingsDepartment of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Fredrik AlmqvistDepartment of Chemistry, Umeå University, 90187, Umeå, Sweden.
Christer LarssonDepartment of Molecular Biology, Umeå University, 90187, Umeå, Sweden. christer.larsson1975@gmail.com.
Umeå University · SEWashington University in St. Louis · US

Funding

TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGYT32GM007067 · NIGMS · WASHINGTON UNIVERSITY · PI TRUE-KROB, HEATHER L · 1985 to 2020
$20.4M
Chemical disarming of drug resistance in Mycobacterium tuberculosisR01AI134847 · NIAID · WASHINGTON UNIVERSITY · PI ALMQVIST, FREDRIK, STALLINGS, CHRISTINA LEIGH · 2018 to 2021
$2.7M
NIAID NIH HHS R01 AI134847NIGMS NIH HHS T32 GM007067
6 · The paper itself

Abstract

Tuberculosis, caused by Mycobacterium tuberculosis (Mtb), is a major health threat listed among the top 10 causes of death worldwide. Treatment of multidrug-resistant Mtb requires use of additional second-line drugs that prolong the treatment process and result in higher death rates. Our team previously identified a 2-pyridone molecule (C10) that blocks tolerance to the first-line drug isoniazid at C10 concentrations that do not inhibit bacterial growth. Here, we discovered that the genes rv3160c and rv3161c are highly induced by C10, which led us to investigate them as potential targets. We show that Rv3160c acts as a TetR-like transcriptional repressor binding to a palindromic sequence located in the rv3161c promoter. We also demonstrate that C10 interacts with Rv3160c, inhibiting its binding to DNA. We deleted the rv3161c gene, coding for a putative oxygenase, to investigate its role in drug and stress sensitivity as well as C10 activity. This Δrv3161c strain was more tolerant to isoniazid and lysozyme than wild type Mtb. However, this tolerance could still be blocked by C10, suggesting that C10 functions independently of Rv3161c to influence isoniazid and lysozyme sensitivity.

Indexed as

Antitubercular AgentsBacterial ProteinsDrug Resistance, MicrobialGene ExpressionGene Expression Regulation, BacterialIsoniazidMycobacterium tuberculosisOxygenasesProtein BindingRepressor ProteinsTetracyclineTranscription FactorsTuberculosisTuberculosis, Multidrug-ResistantAntitubercular AgentsBacterial ProteinsIsoniazidOxygenasesRepressor ProteinsTetracyclineTranscription Factors

Identifiers

PMID33452380
PMCPMC7810876
OpenAlexW3124238566

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.