Evidence map›Paper›PMID 33452327›Full record

ArticleScientific reports2021

Structural variability and differentiation of niches in the rhizosphere and endosphere bacterial microbiome of moso bamboo (Phyllostachys edulis).

Zong-Sheng Yuan, Fang Liu, Zhen-Yu Liu, Qiu-Liang Huang, Guo-Fang Zhang, Hui Pan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

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  18. Bacterial community structure of the sunflower (Plant signaling & behavior · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Zong-Sheng YuanInstitute of Oceanography, Minjiang University, Minhou County, Fuzhou, 350108, Fujian, China.
Fang LiuCollege of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, China.
Zhen-Yu LiuCollege of Plant Protection, Shandong Agricultural University, Tai'an, 271018, Shandong, China.
Qiu-Liang HuangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, China.
Guo-Fang ZhangCollege of Forestry, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian, China.
Hui PanInstitute of Oceanography, Minjiang University, Minhou County, Fuzhou, 350108, Fujian, China. 534705768@qq.com.
Fujian Agriculture and Forestry University · CNMinjiang University · CNShandong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant microbiota play a key role in plant productivity, nutrient uptake, resistance to stress and flowering. The flowering of moso bamboo has been a focus of study. The mechanism of flowering is related to nutrient uptake, temperature, hormone balance and regulation of key genes. However, the connection between microbiota of moso bamboo and its flowering is unknown. In this study, samples of rhizosphere soil, rhizomes, roots and leaves of flowering and nonflowering plants were collected, and 16S rRNA amplicon Illumina sequencing was utilized to separate the bacterial communities associated with different flowering stages of moso bamboo. We identified 5442 OTUs, and the number of rhizosphere soil OTUs was much higher than those of other samples. Principal component analysis (PCA) and hierarchical clustering (Bray Curtis dis) analysis revealed that the bacterial microorganisms related to rhizosphere soil and endophytic tissues of moso bamboo differed significantly from those in bulk soil and rhizobacterial and endosphere microbiomes. In addition, the PCA analyses of root and rhizosphere soil revealed different structures of microbial communities between bamboo that is flowering and not flowering. Through the analysis of core microorganisms, it was found that Flavobacterium, Bacillus and Stenotrophomonas played an important role in the absorption of N elements, which may affect the flowering time of moso bamboo. Our results delineate the complex host-microbe interactions of this plant. We also discuss the potential influence of bacterial microbiome in flowering, which can provide a basis for the development and utilization of moso bamboo.

Indexed as

BacillusBacteriaFlavobacteriumFlowersHigh-Throughput Nucleotide SequencingMicrobiotaNutrientsPlant LeavesPlant RootsPoaceaeRhizomeRhizosphereRNA, Ribosomal, 16SSasaSoilSoil MicrobiologyNutrientsRNA, Ribosomal, 16SSoil

Identifiers

PMID33452327
PMCPMC7810855
OpenAlexW3121857372

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.