Evidence map›Paper›PMID 33452134›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms.

Benjamin D Weger, Cédric Gobet, Fabrice P A David, Florian Atger, Eva Martin, Nicholas E Phillips, Aline Charpagne, Meltem Weger, Felix Naef, Frédéric Gachon

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed, 2 pooled it
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 2 syntheses or guidelines pooled it, 179 citations in OpenAlex.

  1. Circadian clock regulation of hemostasis: a systematic review of molecular pathways.Research and practice in thrombosis and haemostasis · 2026
    Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Co-expression network analysis reveals repression ofbioRxiv : the preprint server for biology · 2026
    Article
  9. Article
  10. Article
  11. Article
  12. Mutually exclusive alternative pre-mRNA splicing promotes adaptive metabolic stress signaling by JNK.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Circadian IOP Rhythm in Rats Is Driven by Neural Signals From the Brain.Investigative ophthalmology & visual science · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Benjamin D WegerSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland.ORCID 0000-0002-1831-3561
Cédric GobetSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland.
Fabrice P A DavidInstitute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland.ORCID 0000-0001-8539-865X
Florian AtgerSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland.ORCID 0000-0002-6497-0650
Eva MartinSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland.
Nicholas E PhillipsInstitute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland.ORCID 0000-0001-7629-9721
Aline CharpagneSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland.
Meltem WegerInstitute for Molecular Bioscience, The University of Queensland, St. Lucia QLD-4072, Australia.ORCID 0000-0002-9452-2373
Felix NaefInstitute of Bioengineering, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland; felix.naef@epfl.ch f.gachon@uq.edu.au.ORCID 0000-0001-9786-3037
Frédéric GachonSociété des Produits Nestlé, Nestlé Research, CH-1015 Lausanne, Switzerland; felix.naef@epfl.ch f.gachon@uq.edu.au.ORCID 0000-0002-9279-9707
Nestlé (Switzerland) · CHÉcole Polytechnique Fédérale de Lausanne · CHThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clock and feeding rhythms are both important regulators of rhythmic gene expression in the liver. To further dissect the respective contributions of feeding and the clock, we analyzed differential rhythmicity of liver tissue samples across several conditions. We developed a statistical method tailored to compare rhythmic liver messenger RNA (mRNA) expression in mouse knockout models of multiple clock genes, as well as PARbZip output transcription factors (

Indexed as

AnimalsARNTL Transcription FactorsBasic-Leucine Zipper Transcription FactorsCircadian ClocksCircadian RhythmCryptochromesDNA-Binding ProteinsFeeding BehaviorGene Expression RegulationLiverMaleMetabolic Networks and PathwaysMiceMice, KnockoutRNA, MessengerTranscription FactorsARNTL Transcription FactorsBasic-Leucine Zipper Transcription FactorsBmal1 protein, mouseCry1 protein, mouseCry2 protein, mouseCryptochromesDbp protein, mouseDNA-Binding ProteinsHlf protein, mouseNfil3 protein, mouseRNA, MessengerTef protein, mouseTranscription Factorscircadian clockdifferential rhythmicity analysisfeeding–fasting cycleliver metabolismtranscriptomics

Identifiers

PMID33452134
PMCPMC7826335
OpenAlexW3119150497

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.