Evidence map›Paper›PMID 33452106›Full record

ArticleScience immunology2021

Inhibitory signaling sustains a distinct early memory CD8

Jonathan B Johnnidis, Yuki Muroyama, Shin Foong Ngiow, Zeyu Chen, Sasikanth Manne, Zhangying Cai, Shufei Song, Jesse M Platt, Jason M Schenkel, Mohamed Abdel-Hakeem and 18 more

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 81 citations in OpenAlex.

  1. Trial
  2. CD8Cell reports. Medicine · 2026
    Review
  3. Article
  4. BATF3 regulates differentiation of CD8Life science alliance · 2026
    Article
  5. Article
  6. ATR kinase inhibitors induce mitochondrial fission in CD8bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Stem-like PD-1Journal for immunotherapy of cancer · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Pre-division TCF1 drop determines long-term CD8 T cell fates.bioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Mitochondrial response to fever boosts TImmunometabolism (Cobham, Surrey) · 2025
    Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 12 institutions in 4 countries.

Jonathan B JohnnidisDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-4308-2504
Yuki MuroyamaDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0001-9839-6370
Shin Foong NgiowDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-5738-2834
Zeyu ChenDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.
Sasikanth ManneDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0001-9856-0871
Zhangying CaiDivision of Biology and Biomedical Sciences, Washington University, St. Louis, MO 63110, USA.
Shufei SongDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-3084-8013
Jesse M PlattDivision of Gastroenterology, Department of Medicine, Massachusetts General Hospital, Boston, MA 02114, USA.
Jason M SchenkelDepartment of Pathology, Brigham and Women's Hospital, Boston, MA 02115, USA.ORCID 0000-0003-4641-6872
Mohamed Abdel-HakeemDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-0226-3464
Jean-Christophe BeltraDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-6363-3572
Allison R GreenplateDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-2614-3072
Mohammed-Alkhatim A AliDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.
Kito NzinghaDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-8839-5208
Josephine R GilesDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-3713-338X
Christelle HarlyT-Cell Biology and Development Unit, Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA.ORCID 0000-0002-8045-9166
John AttanasioInstitute for Immunology, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0001-7498-1452
Kristen E PaukenDepartment of Immunology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-4309-7880
Bertram BengschDepartment of Medicine II, Gastroenterology, Hepatology, Endocrinology, and Infectious Diseases, University Medical Center Freiburg, Germany.ORCID 0000-0003-2552-740X
Michael A PaleyDepartment of Medicine, Washington University in Saint Louis School of Medicine, St. Louis, MO 63110, USA.ORCID 0000-0001-8724-3176
Vesselin T TomovInstitute for Immunology, University of Pennsylvania, Philadelphia, PA 19104, USA.
Makoto KurachiDepartment of Molecular Genetics, Graduate School of Medicine, Kanazawa University, Kanazawa, Japan.ORCID 0000-0002-7202-7822
Dario A A VignaliDepartment of Immunology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.ORCID 0000-0002-2771-5992
Arlene H SharpeDepartment of Immunology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-9736-2109
Steven L ReinerDepartment of Microbiology and Immunology and Department of Pediatrics, Columbia University, New York, NY 10032, USA.ORCID 0000-0002-1635-8619
Avinash BhandoolaT-Cell Biology and Development Unit, Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, Bethesda, MD 20892, USA.ORCID 0000-0002-4657-8372
F Bradley JohnsonDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-7443-7227
E John WherryDepartment of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA 19104, USA. wherry@pennmedicine.upenn.edu.ORCID 0000-0003-0477-1956
Translational Therapeutics (United States) · USParker Institute for Cancer Immunotherapy · USUniversity of Pennsylvania · USBrigham and Women's Hospital · USWashington University in St. Louis · USCentre National de la Recherche Scientifique · FRColumbia University · USKanazawa University · JPMassachusetts General Hospital · USNational Cancer Institute · USUniversity of Freiburg · DEUniversity of Pittsburgh · US

Funding

Virology CoreU19AI082630 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG, GEORG Michael LAUER · 2009 to 2026
$48.1M
Transgenic/KnockoutP01AI056299 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI SHARPE, ARLENE H. · 2003 to 2023
$42.5M
Synergies among inhibitory receptors in tolerance, cancer & antiviral immunityP01AI108545 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI E. John Wherry · 2015 to 2026
$30.8M
T cell Development and RegenerationZIABC011633 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BHANDOOLA, AVINASH · 2015 to 2025
$20.5M
IMMUNOBIOLOGY OF NORMAL AND NEOPLASTIC LYMPHOCYTEST32CA009140 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Malay Haldar, WARREN S PEAR · 1985 to 2026
$16.1M
RESEARCH TRAINING IN DIGESTIVE DISEASES AND NUTRITIONT32DK007191 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1986 to 2026
$14.6M
Modeling HIV CAR-T cell trafficking and persistence in Non-Human PrimatesU19AI149680 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI RILEY, JAMES L. · 2020 to 2024
$13.2M
Sequencing and Viral Evolution CoreU19AI117950 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI WHERRY, E. JOHN · 2015 to 2019
$12.0M
Radiation and checkpoint blockade for cancer immune therapyP01CA210944 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KOUMENIS, CONSTANTINOS · 2017 to 2022
$11.5M
P3: Chemokine-Mediated T Cell Trafficking in HIV Transmission and Immune ResponseP01AI112521 · NIAID · HARVARD MEDICAL SCHOOL · PI LUSTER, ANDREW · 2014 to 2018
$9.8M
Testing the role of BATF as a pioneer transcription factor in effector T cellsR01AI115712 · NIAID · DANA-FARBER CANCER INST · PI KADOCH, CIGALL, WHERRY, E. JOHN · 2015 to 2019
$2.9M
Cellular and transcriptional control of exhausted CD8 T cells lineage dynamicsR01AI105343 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI WHERRY, E. JOHN · 2014 to 2017
$1.6M
NCI NIH HHS P01 CA210944NCI NIH HHS T32 CA009140NIAID NIH HHS P01 AI056299NIAID NIH HHS P01 AI108545NIAID NIH HHS P01 AI112521NIAID NIH HHS R01 AI105343NIAID NIH HHS R01 AI115712NIAID NIH HHS T32 AI070099NIAID NIH HHS U19 AI082630NIAID NIH HHS U19 AI117950NIAID NIH HHS U19 AI149680NIDDK NIH HHS T32 DK007191
6 · The paper itself

Abstract

The developmental origins of memory T cells remain incompletely understood. During the expansion phase of acute viral infection, we identified a distinct subset of virus-specific CD8

Indexed as

AnimalsAntigens, CDCD8-Positive T-LymphocytesCell DifferentiationDisease Models, AnimalDNA DamageFemaleHepatocyte Nuclear Factor 1-alphaHumansImmunologic MemoryListeria monocytogenesListeriosisLymphocyte ActivationLymphocyte Activation Gene 3 ProteinLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusAntigens, CDHepatocyte Nuclear Factor 1-alphaHnf1a protein, mouseLymphocyte Activation Gene 3 ProteinPdcd1 protein, mouseProgrammed Cell Death 1 Receptor

Identifiers

PMID33452106
PMCPMC8258400
OpenAlexW3118683331

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.