Evidence map›Paper›PMID 33448339›Full record

ReviewClinical pharmacology and therapeutics2021

PharmVar GeneFocus: CYP2B6.

Zeruesenay Desta, Ahmed El-Boraie, Li Gong, Andrew A Somogyi, Volker M Lauschke, Collet Dandara, Kathrin Klein, Neil A Miller, Teri E Klein, Rachel F Tyndale and 2 more

Open access · bronzeAbstract readReview
In one paragraph

Review in Clinical pharmacology and therapeutics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
32.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 233 citations in OpenAlex.

  1. Guideline
  2. Pharmacogenetic Influence on Stereoselective Steady-State Disposition of Bupropion.Drug metabolism and disposition: the biological fate of chemicals · 2024
    Trial
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Applicability domain-expansion studies for machine learning models reveal new inhibitors of CYP2B6.Drug metabolism and disposition: the biological fate of chemicals · 2025
    Article
  10. Review
  11. Review
  12. Observational
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. PharmVar GeneFocus: CYP4F2.Clinical pharmacology and therapeutics · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 10 institutions in 6 countries.

Zeruesenay DestaDivision of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Ahmed El-BoraieCentre for Addiction and Mental Health and Departments of Pharmacology & Toxicology, and Psychiatry, University of Toronto, Toronto, Canada.
Li GongDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Andrew A SomogyiDiscipline of Pharmacology, Adelaide Medical School, University of Adelaide, Adelaide, Australia.
Volker M LauschkeDepartment of Physiology and Pharmacology, Karolinska Institutet, Stockholm, Sweden.
Collet DandaraDivision of Human Genetics, Department of Pathology & Institute of Infectious Disease and Molecular Medicine, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Kathrin KleinDr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology, Stuttgart, Germany.
Neil A MillerGenomic Medicine Center, Children's Mercy, Kansas City, Missouri, USA.
Teri E KleinDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Rachel F TyndaleCentre for Addiction and Mental Health and Departments of Pharmacology & Toxicology, and Psychiatry, University of Toronto, Toronto, Canada.
Michelle Whirl-CarrilloDepartment of Biomedical Data Science, Stanford University, Stanford, California, USA.
Andrea GaedigkDivision of Clinical Pharmacology, Toxicology & Therapeutic Innovation, Children's Mercy, Kansas City, Missouri, USA.
Stanford University · USCentre for Addiction and Mental Health · CAChildren's Mercy Hospital · USIndiana University School of MedicineKarolinska Institutet · SEMercy Research · USUniversity of Adelaide · AUUniversity of Cape Town · ZAUniversity of Toronto · CAUniversity of Tübingen · DE

Funding

PharmGKB: pharmacogenomics discovery and implementationU24HG010615 · NHGRI · STANFORD UNIVERSITY · PI TERI Ellen KLEIN, Michelle Whirl-Carrillo · 2020 to 2026
$9.5M
CYP2B6 Genetic Variations and Drug InteractionsR01GM078501 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI DESTA, ZERUESENAY · 2007 to 2015
$3.2M
PHARMacogene VARiation ConsortiumR24GM123930 · NIGMS · CHILDREN'S MERCY HOSP (KANSAS CITY, MO) · PI GAEDIGK, ANDREA · 2017 to 2020
$1.9M
Mechanisms Underlying Stereoselective Bupropion Metabolism and Complex Drug Interactions.R01GM121707 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI DESTA, ZERUESENAY · 2017 to 2020
$1.5M
CIHR PJY-159710NHGRI NIH HHS U24 HG010615NIGMS NIH HHS R01 GM078501NIGMS NIH HHS R01 GM121707NIGMS NIH HHS R24 GM123930
6 · The paper itself

Abstract

The Pharmacogene Variation Consortium (PharmVar) catalogs star (*) allele nomenclature for the polymorphic human CYP2B6 gene. Genetic variation within the CYP2B6 gene locus impacts the metabolism or bioactivation of clinically important drugs. Of particular importance are efficacy and safety concerns regarding: efavirenz, which is used for the treatment of HIV type-1 infection; methadone, a mainstay in the treatment of opioid use disorder and as an analgesic; ketamine, used as an antidepressant and analgesic; and bupropion, which is prescribed to treat depression and for smoking cessation. This GeneFocus provides a comprehensive overview and summary of CYP2B6 and describes how haplotype information catalogued by PharmVar is utilized by the Pharmacogenomics Knowledgebase (PharmGKB) and the Clinical Pharmacogenetics Implementation Consortium (CPIC).

Indexed as

Genetic VariationPharmacogeneticsAllelesCytochrome P-450 CYP2B6HaplotypesHumansKnowledge BasesCYP2B6 protein, humanCytochrome P-450 CYP2B6

Identifiers

PMID33448339
PMCPMC8693800
OpenAlexW2976816195

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.