Evidence map›Paper›PMID 33446654›Full record

ArticleNature communications2021

Identification of fidelity-governing factors in human recombinases DMC1 and RAD51 from cryo-EM structures.

Shih-Chi Luo, Hsin-Yi Yeh, Wei-Hsuan Lan, Yi-Min Wu, Cheng-Han Yang, Hao-Yen Chang, Guan-Chin Su, Chia-Yi Lee, Wen-Jin Wu, Hung-Wen Li and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

  1. Mechanisms That Govern Recombinase Fidelity Control During Eukaryotic Homologous Recombination.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. ATP hydrolysis-driven structural transitions within thebioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Dysfunction of Gpl1-Gih35-Wdr83 Complex inInternational journal of molecular sciences · 2024
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Shih-Chi Luo *Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Hsin-Yi Yeh *Institute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan.
Wei-Hsuan LanDepartment of Chemistry, National Taiwan University, Taipei, Taiwan.
Yi-Min WuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Cheng-Han YangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID 0000-0001-7517-3799
Hao-Yen ChangInstitute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan.
Guan-Chin SuInstitute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan.
Chia-Yi LeeInstitute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan.
Wen-Jin WuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-7253-5384
Hung-Wen LiDepartment of Chemistry, National Taiwan University, Taipei, Taiwan.ORCID 0000-0002-5614-3727
Meng-Chiao HoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan. joeho@gate.sinica.edu.tw.ORCID 0000-0002-5424-4524
Peter ChiInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan. peterhchi@ntu.edu.tw.ORCID 0000-0001-9229-8729
Ming-Daw TsaiInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan. mdtsai@gate.sinica.edu.tw.ORCID 0000-0003-1374-0414
National Taiwan University · TWInstitute of Biological Chemistry, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Both high-fidelity and mismatch-tolerant recombination, catalyzed by RAD51 and DMC1 recombinases, respectively, are indispensable for genomic integrity. Here, we use cryo-EM, MD simulation and functional analysis to elucidate the structural basis for the mismatch tolerance of DMC1. Structural analysis of DMC1 presynaptic and postsynaptic complexes suggested that the lineage-specific Loop 1 Gln244 (Met243 in RAD51) may help stabilize DNA backbone, whereas Loop 2 Pro274 and Gly275 (Val273/Asp274 in RAD51) may provide an open "triplet gate" for mismatch tolerance. In support, DMC1-Q244M displayed marked increase in DNA dynamics, leading to unobservable DNA map. MD simulation showed highly dispersive mismatched DNA ensemble in RAD51 but well-converged DNA in DMC1 and RAD51-V273P/D274G. Replacing Loop 1 or Loop 2 residues in DMC1 with RAD51 counterparts enhanced DMC1 fidelity, while reciprocal mutations in RAD51 attenuated its fidelity. Our results show that three Loop 1/Loop 2 residues jointly enact contrasting fidelities of DNA recombinases.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsCell Cycle ProteinsCryoelectron MicroscopyDNA-Binding ProteinsDNA, Single-StrandedHumansMiceProtein Conformation, alpha-HelicalRad51 RecombinaseSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentCell Cycle ProteinsDMC1 protein, humanDNA-Binding ProteinsDNA, Single-StrandedRad51 RecombinaseSaccharomyces cerevisiae Proteins

Identifiers

PMID33446654
PMCPMC7809202
OpenAlexW3125130012

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.