Evidence map›Paper›PMID 33446492›Full record

ArticleRNA (New York, N.Y.)2021

Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).

Vairavan Lakshmanan, T N Sujith, Dhiru Bansal, Padubidri V Shivaprasad, Dasaradhi Palakodeti, Srikar Krishna

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Genome-Wide Analysis of Planarian piRNAs.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  6. Article
  7. Review
  8. Transposon control as a checkpoint for tissue regeneration.Development (Cambridge, England) · 2022
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Role ofFrontiers in cellular and infection microbiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Vairavan LakshmananInstitute for Stem Cell Science and Regenerative Medicine (inStem), 560065 Bangalore, India.ORCID 0000-0001-9468-9571
T N SujithNational Centre for Biological Sciences (NCBS), 560065 Bangalore, India.
Dhiru BansalInstitute for Stem Cell Science and Regenerative Medicine (inStem), 560065 Bangalore, India.
Padubidri V ShivaprasadNational Centre for Biological Sciences (NCBS), 560065 Bangalore, India.
Dasaradhi PalakodetiInstitute for Stem Cell Science and Regenerative Medicine (inStem), 560065 Bangalore, India.ORCID 0000-0003-2219-4785
Srikar KrishnaInstitute for Stem Cell Science and Regenerative Medicine (inStem), 560065 Bangalore, India.ORCID 0000-0001-7383-2252
Institute for Stem Cell Biology and Regenerative Medicine · INNational Centre for Biological Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

tRNA-derived fragments (tRFs) have recently gained a lot of scientific interest due to their diverse regulatory roles in several cellular processes. However, their function in dynamic biological processes such as development and regeneration remains unexplored. Here, we show that tRFs are dynamically expressed during planarian regeneration, suggesting a possible role for these small RNAs in the regulation of regeneration. In order to characterize planarian tRFs, we first annotated 457 tRNAs in

Indexed as

AlgorithmsAnimalsArgonaute ProteinsBase PairingBase SequenceGene Expression RegulationHelminth ProteinsMolecular Sequence AnnotationNucleic Acid ConformationPlanariansRegenerationRNA, HelminthRNA, Small UntranslatedRNA, TransferArgonaute ProteinsHelminth ProteinsRNA, HelminthRNA, Small UntranslatedRNA, Transferplanariaregenerationsmall RNAtRFstRNA

Identifiers

PMID33446492
PMCPMC7962491
OpenAlexW3123788958

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.