Evidence map›Paper›PMID 33446211›Full record

ArticleProteome science2021

ITRAQ-based quantitative proteomic analysis of Fusarium moniliforme (Fusarium verticillioides) in response to Phloridzin inducers.

Rong Zhang, Weitao Jiang, Xin Liu, Yanan Duan, Li Xiang, Yanfang Wang, Yuanmao Jiang, Xiang Shen, Xuesen Chen, Chengmiao Yin and 1 more

Abstract read
In one paragraph

Article in Proteome science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rong Zhang *State Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Weitao Jiang *State Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Xin Liu *State Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an, 271018, Shandong, China.
Yanan DuanState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Li XiangState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Yanfang WangCollege of Chemistry and Material Science, Shandong Agricultural University, Tai'an, 271018, Shandong, China.
Yuanmao JiangState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Xiang ShenState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Xuesen ChenState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China.
Chengmiao YinState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China. yinchengmiao@163.com.
Zhiquan MaoState Key Laboratory of Crop Biology/College of Horticultural Science and Engineering, Shandong Agricultural University, Daizong Road No.61, Tai'an, 271018, Shandong, China. mzhiquan@sdau.edu.cn.

Funding

earmarked fund for National Modern Agro-industry Technology Research System of China CARS-27Fruit innovation team in Shandong Province, China SDAIT-06-07National Natural Science Foundation of China 31501720National Natural Science Foundation of China 31672104National Natural Science Foundation of China 32072510Qingchuang Science and Technology Support Project of Shandong Colleges and Universities 2019KJF020Shandong Agricultural Major Applied Technology Innovation Project SD2019ZZ008Taishan Scholar Project of Shandong Province NO.ts20190923the National Key Research and Development Program of China 2016YFD0201114
6 · The paper itself

Abstract

backgroundApple replant disease (ARD) has been reported from all major fruit-growing regions of the world, and is often caused by biotic factors (pathogen fungi) and abiotic factors (phenolic compounds). In order to clarify the proteomic differences of Fusarium moniliforme under the action of phloridzin, and to explore the potential mechanism of F. moniliforme as the pathogen of ARD, the role of Fusarium spp. in ARD was further clarified.

methodsIn this paper, the quantitative proteomics method iTRAQ analysis technology was used to analyze the proteomic differences of F. moniliforme before and after phloridzin treatment. The differentially expressed protein was validated by qRT-PCR analysis.

resultsA total of 4535 proteins were detected, and 293 proteins were found with more than 1.2 times (P< 0.05) differences. In-depth data analysis revealed that 59 proteins were found with more than 1.5 times (P< 0.05) differences, and most proteins were consistent with the result of qRT-PCR. Differentially expressed proteins were influenced a variety of cellular processes, particularly metabolic processes. Among these metabolic pathways, a total of 8 significantly enriched KEGG pathways were identified with at least 2 affiliated proteins with different abundance in conidia and mycelium. Functional pathway analysis indicated that up-regulated proteins were mainly distributed in amino sugar, nucleotide sugar metabolism, glycolysis/ gluconeogenesis and phagosome pathways.

conclusionsThis study is the first to perform quantitative proteomic investigation by iTRAQ labeling and LC-MS/MS to identify differentially expressed proteins in F. moniliforme under phloridzin conditions. The results confirmed that F. moniliforme presented a unique protein profile that indicated the adaptive mechanisms of this species to phloridzin environments. The results deepened our understanding of the proteome in F. moniliforme in response to phloridzin inducers and provide a basis for further exploration for improving the efficiency of the fungi as biocontrol agents to control ARD.

Indexed as

Differential protein expressionF. moniliformeiTRAQMycelium proteomicsPhloridzin

Identifiers

PMID33446211
PMCPMC7807804

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.