Evidence map›Paper›PMID 33443164›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

A genome-wide microRNA screen identifies the microRNA-183/96/182 cluster as a modulator of circadian rhythms.

Lili Zhou, Caitlyn Miller, Loren J Miraglia, Angelica Romero, Ludovic S Mure, Satchidananda Panda, Steve A Kay

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Role of chronotype in depression.World journal of psychiatry · 2025
    Review
  5. Melatonin and retinal cell damage: molecular and biological functions.Naunyn-Schmiedeberg's archives of pharmacology · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Behavioural phenotypes of Dicer knockout in the mouse SCN.The European journal of neuroscience · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Lili ZhouKeck School of Medicine, University of Southern California, Los Angeles, CA 90089.
Caitlyn MillerKeck School of Medicine, University of Southern California, Los Angeles, CA 90089.
Loren J MiragliaGenomics Institute of the Novartis Research Foundation, San Diego, CA 92121.
Angelica RomeroGenomics Institute of the Novartis Research Foundation, San Diego, CA 92121.
Ludovic S MureSalk Institute for Biological Studies, La Jolla, CA 92037.
Satchidananda PandaSalk Institute for Biological Studies, La Jolla, CA 92037.
Steve A KayKeck School of Medicine, University of Southern California, Los Angeles, CA 90089; stevekay@usc.edu.ORCID 0000-0002-0402-2878
University of Southern California · USGenomics Institute of the Novartis Research Foundation · USSalk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
The Role of Cryptochromes in Circadian Regulation of MetabolismR01DK108087 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAY, STEVE A · 2016 to 2018
$1.9M
NCI NIH HHS P30 CA014195NIDDK NIH HHS R01 DK108087
6 · The paper itself

Abstract

The regulatory mechanisms of circadian rhythms have been studied primarily at the level of the transcription-translation feedback loops of protein-coding genes. Regulatory modules involving noncoding RNAs are less thoroughly understood. In particular, emerging evidence has revealed the important role of microRNAs (miRNAs) in maintaining the robustness of the circadian system. To identify miRNAs that have the potential to modulate circadian rhythms, we conducted a genome-wide miRNA screen using U2OS luciferase reporter cells. Among 989 miRNAs in the library, 120 changed the period length in a dose-dependent manner. We further validated the circadian regulatory function of an miRNA cluster, miR-183/96/182, both in vitro and in vivo. We found that all three members of this miRNA cluster can modulate circadian rhythms. Particularly, miR-96 directly targeted a core circadian clock gene, PER2. The knockout of the miR-183/96/182 cluster in mice showed tissue-specific effects on circadian parameters and altered circadian rhythms at the behavioral level. This study identified a large number of miRNAs, including the miR-183/96/182 cluster, as circadian modulators. We provide a resource for further understanding the role of miRNAs in the circadian network and highlight the importance of miRNAs as a genome-wide layer of circadian clock regulation.

Indexed as

AnimalsCell Line, TumorCircadian RhythmGene Expression RegulationGene Knock-In TechniquesGene Knockout TechniquesGenomicsHumansLuciferasesLungMiceMicroRNAsMultigene FamilyOrgan SpecificityPeriod Circadian ProteinsRetinaLuciferasesMicroRNAsMirn182 microRNA, humanMIRN183 microRNA, humanMIRN96 microRNA, humanPER2 protein, humanPeriod Circadian Proteinscircadian rhythmsgenome-wide screenmiR-183/96/182 clustermiRNA

Identifiers

PMID33443164
PMCPMC7817116
OpenAlexW3117866707

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.