Evidence map›Paper›PMID 33443125›Full record

ArticlemBio2020

Availability of the Molecular Switch XylR Controls Phenotypic Heterogeneity and Lag Duration during Escherichia coli Adaptation from Glucose to Xylose.

Manon Barthe, Josué Tchouanti, Pedro Henrique Gomes, Carine Bideaux, Delphine Lestrade, Carl Graham, Jean-Philippe Steyer, Sylvie Meleard, Jérôme Harmand, Nathalie Gorret and 2 more

Abstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Manon BartheTBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.
Josué TchouantiCMAP, CNRS, Ecole Polytechnique, IP Paris, Palaiseau, France.
Pedro Henrique GomesTBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.
Carine BideauxTBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.
Delphine LestradeTWB, Université de Toulouse, CNRS, INRA, INSA, Ramonville-Saint-Agne, France.
Carl GrahamCMAP, CNRS, Ecole Polytechnique, IP Paris, Palaiseau, France.
Jean-Philippe SteyerINRAE, Université de Montpellier, LBE, Narbonne, France.
Sylvie MeleardCMAP, CNRS, Ecole Polytechnique, IP Paris, Palaiseau, France.
Jérôme HarmandINRAE, Université de Montpellier, LBE, Narbonne, France.
Nathalie GorretTBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.
Muriel Cocaign-Bousquet *TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France cocaign@insa-toulouse.fr.ORCID 0000-0003-2033-9901
Brice Enjalbert *TBI, Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The glucose-xylose metabolic transition is of growing interest as a model to explore cellular adaption since these molecules are the main substrates resulting from the deconstruction of lignocellulosic biomass. Here, we investigated the role of the XylR transcription factor in the length of the lag phases when the bacterium

Indexed as

Adaptation, PhysiologicalDNA, BacterialEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGlucosePhenotypeTranscription FactorsXyloseDNA, BacterialEscherichia coli ProteinsGlucoseTranscription FactorsXyloseXylR protein, E coliadaptationEscherichia coliheterogeneitymetabolic transitionsubpopulations

Identifiers

PMID33443125
PMCPMC8534289

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.