Evidence map›Paper›PMID 33441806›Full record

ArticleScientific reports2021

Sex-specific differences in peripheral blood leukocyte transcriptional response to LPS are enriched for HLA region and X chromosome genes.

Michelle M Stein, Mitch Conery, Kevin M Magnaye, Selene M Clay, Christine Billstrand, Raluca Nicolae, Katherine Naughton, Carole Ober, Emma E Thompson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
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  11. Immune Sexual Dimorphism: Connecting the Dots.Physiology (Bethesda, Md.) · 2022
    Review
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  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Michelle M SteinDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Mitch ConeryDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Kevin M MagnayeDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Selene M ClayDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Christine BillstrandDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Raluca NicolaeDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Katherine NaughtonDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Carole OberDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA.
Emma E ThompsonDepartment of Human Genetics, University of Chicago, Chicago, IL, 60637, USA. eethomps@uchicago.edu.
University of Chicago · US

Funding

Wisconsin Infant Study Cohort (WISC) ECHO Pediatric Follow-UpUG3OD023282 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E. · 2016 to 2024
$19.3M
RESEARCH TRAINING IN RESPIRATORY BIOLOGYT32HL007605 · NHLBI · UNIVERSITY OF CHICAGO · PI Yun Fang, Gokhan M. Mutlu · 1985 to 2026
$18.1M
PREDOCTORAL TRAINING IN GENETICS AND REGULATIONT32GM007197 · NIGMS · UNIVERSITY OF CHICAGO · PI ROTHMAN-DENES, LUCIA B. B · 1985 to 2020
$17.0M
Sex-Specific Genetic Architecture of Asthma-Associated Quantitative TraitsR01HL085197 · NHLBI · UNIVERSITY OF CHICAGO · PI OBER, CAROLE · 2007 to 2015
$7.6M
Prenatal Origins of AsthmaR01HL129735 · NHLBI · UNIVERSITY OF CHICAGO · PI BISGAARD, HANS, OBER, CAROLE · 2015 to 2018
$3.2M
Dissecting the Genetic Architecture of Airway HyperresponsivenessR01HL113395 · NHLBI · UNIVERSITY OF CHICAGO · PI THOMPSON, EMMA E · 2014 to 2018
$2.0M
Elucidating the Role of Mitochondrial and X Chromosome Variation on the Genetic Architecture of Complex TraitsF31HL143891 · NHLBI · UNIVERSITY OF CHICAGO · PI MAGNAYE, KEVIN MATTHEW · 2018 to 2020
$108k
NHLBI NIH HHS F31 HL143891NHLBI NIH HHS R01 HL085197NHLBI NIH HHS R01 HL113395NHLBI NIH HHS R01 HL129735NHLBI NIH HHS T32 HL007605NIGMS NIH HHS T32 GM007197NIH HHS UG3 OD023282
6 · The paper itself

Abstract

Sex-specific differences in prevalence are well documented for many common, complex diseases, especially for immune-mediated diseases, yet the precise mechanisms through which factors associated with biological sex exert their effects throughout life are not well understood. We interrogated sex-specific transcriptional responses of peripheral blood leukocytes (PBLs) to innate immune stimulation by lipopolysaccharide (LPS) in 46 male and 66 female members of the Hutterite community, who practice a communal lifestyle. We identified 1217 autosomal and 54 X-linked genes with sex-specific responses to LPS, as well as 71 autosomal and one X-linked sex-specific expression quantitative trait loci (eQTLs). Despite a similar proportion of the 15 HLA genes responding to LPS compared to all expressed autosomal genes, there was a significant over-representation of genes with sex by treatment interactions among HLA genes. We also observed an enrichment of sex-specific differentially expressed genes in response to LPS for X-linked genes compared to autosomal genes, suggesting that HLA and X-linked genes may disproportionately contribute to sex disparities in risk for immune-mediated diseases.

Indexed as

Genes, MHC Class IGenes, MHC Class IIGenes, X-LinkedSex CharacteristicsTranscription, GeneticAdolescentAdultAgedAged, 80 and overChildEthnicityFemaleGene Expression ProfilingHumansImmunity, InnateLeukocytesLipopolysaccharides

Identifiers

PMID33441806
PMCPMC7806814
OpenAlexW3120876101

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.