Evidence map›Paper›PMID 33441424›Full record

ArticleScience translational medicine2021

Kidney disease genetic risk variants alter lysosomal beta-mannosidase (

Xiangchen Gu, Hongliu Yang, Xin Sheng, Yi-An Ko, Chengxiang Qiu, Jihwan Park, Shizheng Huang, Rachel Kember, Renae L Judy, Joseph Park and 18 more

Open access · greenAbstract read
In one paragraph

Article in Science translational medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 2 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 2 syntheses or guidelines pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  12. Toxic Effects of Acute Water Selenium Exposure onAnimals : an open access journal from MDPI · 2025
    Article
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  19. Genome-wide association studies reconstructing chronic kidney disease.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2024
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 9 institutions in 2 countries.

Xiangchen GuDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0003-1159-8565
Hongliu YangDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0001-5304-4777
Xin ShengDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-3620-3577
Yi-An KoDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Chengxiang QiuDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-6346-8669
Jihwan ParkDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-5728-912X
Shizheng HuangDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-9240-1578
Rachel KemberInstitute for Translational Medicine and Therapeutics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0001-8820-2659
Renae L JudyDepartment of Surgery, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Joseph ParkInstitute for Translational Medicine and Therapeutics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0002-3313-641X
Scott M DamrauerDepartment of Surgery, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Girish NadkarniDivision of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Ruth J F LoosThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0002-8532-5087
Vy Thi Ha MyThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0002-5117-3740
Kumardeep ChaudharyThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0002-4117-6403
Erwin P BottingerThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0001-6868-6676
Ishan ParanjpeThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0001-5144-0370
Aparna SahaThe Charles Bronfman Institute of Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.ORCID 0000-0003-3911-8391
Christopher BrownDepartment of Genetics Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID 0000-0002-3785-5008
Shreeram AkileshDepartment of Pathology, University of Washington, Seattle, WA 98195, USA.ORCID 0000-0003-3152-7991
Adriana M HungNashville VA Medical Center, Nashville, TN 37212, USA.ORCID 0000-0002-3203-1608
Matthew PalmerDepartment of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Aris BarasRegeneron Genetics Center (RGC), 777 Old Saw Mill River Rd., Tarrytown, NY 10591, USA.
John D OvertonRegeneron Genetics Center (RGC), 777 Old Saw Mill River Rd., Tarrytown, NY 10591, USA.ORCID 0000-0001-7650-8634
Jeffrey ReidRegeneron Genetics Center (RGC), 777 Old Saw Mill River Rd., Tarrytown, NY 10591, USA.ORCID 0000-0001-8645-4713
Marylyn RitchieInstitute for Translational Medicine and Therapeutics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0002-1208-1720
Daniel J RaderDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Katalin SusztakDepartment of Medicine Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. ksusztak@pennmedicine.upenn.edu.ORCID 0000-0002-1005-3726
University of Pennsylvania · USIcahn School of Medicine at Mount Sinai · USTranslational Therapeutics (United States) · USRegeneron (United States) · USNashville VA Medical Center · USPhiladelphia VA Medical Center · USShanghai University of Traditional Chinese Medicine · CNSichuan University · CNUniversity of Washington · US

Funding

Phenotypic Diversity in COVID-19UL1TR001878 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2016 to 2025
$102.4M
Role of the Notch Pathway in Kidney InjuryR01DK076077 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KATALIN SUSZTAK · 2007 to 2026
$8.0M
Epigenetics of Chronic Kidney DiseaseR01DK087635 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KATALIN SUSZTAK · 2009 to 2026
$7.0M
APOL1 associated kidney diseaseR01DK105821 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SUSZTAK, KATALIN · 2016 to 2024
$4.6M
Epigenetic drivers and biomarkers of diabetic kidney diseaseDP3DK108220 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SUSZTAK, KATALIN · 2015 to 2015
$2.4M
The role of cytosolic nucleotide sensors in inflammatory fibrosisR01DK132630 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SUSZTAK, KATALIN · 2022 to 2025
$2.0M
Precision Cardio-Metabolic Phenotyping for Genetic Discovery and Risk PredictionIK2CX001780 · VA · PHILADELPHIA VA MEDICAL CENTER · PI DAMRAUER, SCOTT MICHAEL · 2018 to 2023
–
Pharmacogenomics of risk factors and therapies outcomes for kidney diseaseI01BX003360 · VA · VETERANS HEALTH ADMINISTRATION · PI HUNG, ADRIANA · 2017 to 2020
–
BLRD VA I01 BX003360CSRD VA IK2 CX001780NCATS NIH HHS UL1 TR001878NIDDK NIH HHS DP3 DK108220NIDDK NIH HHS R01 DK076077NIDDK NIH HHS R01 DK087635NIDDK NIH HHS R01 DK105821NIDDK NIH HHS R01 DK132630
6 · The paper itself

Abstract

More than 800 million people in the world suffer from chronic kidney disease (CKD). Genome-wide association studies (GWAS) have identified hundreds of loci where genetic variants are associated with kidney function; however, causal genes and pathways for CKD remain unknown. Here, we performed integration of kidney function GWAS and human kidney-specific expression quantitative trait analysis and identified that the expression of beta-mannosidase (

Indexed as

beta-MannosidaseKidney DiseasesAnimalsGenome-Wide Association StudyHumansLysosomesMannosidasesMiceRisk FactorsSeverity of Illness Indexbeta-MannosidaseMANBA protein, humanMannosidases

Identifiers

PMID33441424
PMCPMC8627675
OpenAlexW3118823028

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.