Evidence map›Paper›PMID 33440006›Full record

ArticleFEMS microbiology ecology2021

Democratization of fungal highway columns as a tool to investigate bacteria associated with soil fungi.

Pilar Junier, Guillaume Cailleau, Ilona Palmieri, Celine Vallotton, Olivia C Trautschold, Thomas Junier, Christophe Paul, Danae Bregnard, Fabio Palmieri, Aislinn Estoppey and 16 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in FEMS microbiology ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Complete genome sequence ofMicrobiology resource announcements · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Genomic Based Analysis of the Biocontrol SpeciesJournal of fungi (Basel, Switzerland) · 2023
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Pilar JunierLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Guillaume CailleauLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Ilona PalmieriLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Celine VallottonLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Olivia C TrautscholdMaterials Science and Technology, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Thomas JunierLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Christophe PaulLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Danae BregnardLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Fabio PalmieriLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Aislinn EstoppeyLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Matteo BuffiLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Andrea LohbergerLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Aaron RobinsonBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Julia M KelliherBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Karen DavenportBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Geoffrey L HouseBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Demosthenes MoralesBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
La Verne Gallegos-GravesBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Armand E K DichosaBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Simone LupiniCivil and Environmental Engineering, University of Houston, Houston, TX 77004, USA.
Hang N NguyenCivil and Environmental Engineering, University of Houston, Houston, TX 77004, USA.
Jamey D YoungDepartment of Chemical and Biomolecular Engineering, and Department of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN 37212, USA.
Debora F RodriguesCivil and Environmental Engineering, University of Houston, Houston, TX 77004, USA.
A Nicholas G Parra-VasquezMaterials Science and Technology, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.
Saskia BindschedlerLaboratory of Microbiology, Institute of Biology, University of Neuchâtel, CH, 2000, Neuchâtel, Switzerland.
Patrick S G ChainBioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87544, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria-fungi interactions (BFIs) are essential in ecosystem functioning. These interactions are modulated not only by local nutritional conditions but also by the physicochemical constraints and 3D structure of the environmental niche. In soils, the unsaturated and complex nature of the substrate restricts the dispersal and activity of bacteria. Under unsaturated conditions, some bacteria engage with filamentous fungi in an interaction (fungal highways) in which they use fungal hyphae to disperse. Based on a previous experimental device to enrich pairs of organisms engaging in this interaction in soils, we present here the design and validation of a modified version of this sampling system constructed using additive printing. The 3D printed devices were tested using a novel application in which a target fungus, the common coprophilous fungus Coprinopsis cinerea, was used as bait to recruit and identify bacterial partners using its mycelium for dispersal. Bacteria of the genera Pseudomonas, Sphingobacterium and Stenotrophomonas were highly enriched in association with C. cinerea. Developing and producing these new easy-to-use tools to investigate how bacteria overcome dispersal limitations in cooperation with fungi is important to unravel the mechanisms by which BFIs affect processes at an ecosystem scale in soils and other unsaturated environments.

Indexed as

SoilSoil MicrobiologyAgaricalesBacteriaEcosystemFungiSoiladditive printingbacteria–fungi interactionsCoprinopsishorse dungsoil

Identifiers

PMID33440006
PMCPMC7878174

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.