Evidence map›Paper›PMID 33439775›Full record

ArticleAmerican journal of physiology. Cell physiology2021

Global changes to HepG2 cell metabolism in response to galactose treatment.

R A Skolik, J Solocinski, M E Konkle, N Chakraborty, M A Menze

Open access · greenAbstract readComparative Study
In one paragraph

Article in American journal of physiology. Cell physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

R A SkolikDepartment of Biology, University of Louisville, Louisville, Kentucky.
J SolocinskiDepartment of Mechanical Engineering, University of Michigan, Dearborn, Michigan.
M E KonkleDepartment of Chemistry, Ball State University, Muncie, Indiana.
N ChakrabortyDepartment of Mechanical Engineering, University of Michigan, Dearborn, Michigan.
M A MenzeDepartment of Biology, University of Louisville, Louisville, Kentucky.ORCID 0000-0003-1072-5462
University of Louisville · USUniversity of Michigan–Dearborn · USBall State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor cell proliferation requires sufficient metabolic flux through the pentose phosphate pathway to meet the demand for biosynthetic precursors and to increase protection against oxidative stress which in turn requires an upregulation of substrate flow through glycolysis. This metabolic poise is often coupled with a shift in ATP production from mitochondrial OXPHOS to substrate-level phosphorylation. Despite major advances that were facilitated by using tumor-derived cell lines in research areas spanning from membrane to cytoskeletal biology, this distorted metabolic profile limits their impact as a model in physiology and toxicology. Substitution of glucose with galactose in the cell culture medium has been demonstrated to shift ATP production from substrate-level phosphorylation to mitochondrial OXPHOS. This increase in oxygen utilization is coupled to a global metabolic reorganization with potential impacts on macromolecule biosynthesis and cellular redox homeostasis, but a comprehensive analysis on the effects of sugar substitution in tumor-derived cells is still missing. To address this gap in knowledge we performed transcriptomic and metabolomic analyses on human hepatocellular carcinoma (HepG2) cells adapted to either glucose or galactose as the aldohexose source. We observed a shift toward oxidative metabolism in all primary metabolic pathways at both transcriptomic and metabolomic levels. We also observed a decrease in nicotinamide dinucleotide (NAD(P)) levels and subcellular NAD

Indexed as

Carcinoma, HepatocellularCell ProliferationEnergy MetabolismGalactoseGene Expression Regulation, NeoplasticGlucoseHepatocytesHep G2 CellsHumansLiver NeoplasmsMetabolomeMitochondria, LiverOxidation-ReductionPhenotypeTime FactorsTranscriptomeGalactoseGlucosegalactoseHepG2mitochondriaNADredox state

Identifiers

PMID33439775
PMCPMC8163570
OpenAlexW3118821920

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.