Evidence map›Paper›PMID 33438116›Full record

ArticleTropical animal health and production2021

Genetic diversity and population structure of three native cattle populations in Mozambique.

Felix J M King, Cuthbert B Banga, Carina Visser

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Article in Tropical animal health and production, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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6citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Felix J M KingDepartment of Animal Sciences, University of Pretoria, Private Bag X20, Hatfield, 0028, South Africa. fejomak@gmail.com.ORCID http://orcid.org/0000-0002-7762-0254
Cuthbert B BangaAnimal Production Institute, Agricultural Research Council, Private Bag X2, Irine, 0062, South Africa.
Carina VisserDepartment of Animal Sciences, University of Pretoria, Private Bag X20, Hatfield, 0028, South Africa.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the present work, the population diversity and structure of three populations of native Mozambican cattle were studied, to develop knowledge that is required for sound conservation and genetic improvement programs of these genetic resources. A total of 228 animals (Landim, Angone, and Tete) were genotyped using the International Dairy and Beef version three (IDBV3) SNP BeadChip array. Population parameters varied within a limited scope, with the average minor allele frequency (MAF) ranging from 0.228 ± 0.154 in the Angone to 0.245 ± 0.145 in the Tete population, while estimates of expected heterozygosities varied from 0.304 ± 0.166 in the Angone to 0.329 ± 0.148 in the Tete population. Low positive (0.065 ± 0.109) inbreeding rates were detected in the three cattle groups. Population structure and admixture analyses indicated low genetic differentiation and various degrees of admixture among the populations. The effective population size has decreased over time and at 12 generations ago ranged between 349 (Tete) and 929 (Landim). The average linkage disequilibrium (LD) of the studied populations ranged from 0.400 ± 0.213 (Tete) to 0.434 ± 0.232 (Landim). The findings of this study will be valuable for formulating management and conservation strategies for indigenous Mozambican cattle populations.

Indexed as

InbreedingPolymorphism, Single NucleotideAnimalsCattleGenetic VariationGenotypeLinkage DisequilibriumMozambiqueAdmixtureAngoneLandimSmallholderTete

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.