Evidence map›Paper›PMID 33436839›Full record

ArticleScientific reports2021

Characterization of Bacillus velezensis AK-0 as a biocontrol agent against apple bitter rot caused by Colletotrichum gloeosporioides.

Young Soo Kim, Younmi Lee, Wonsu Cheon, Jungwook Park, Hyeok-Tae Kwon, Kotnala Balaraju, Jungyeon Kim, Yeo Jun Yoon, Yongho Jeon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 85 citations in OpenAlex.

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  13. Antifungal Effect ofInternational journal of molecular sciences · 2023
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  18. Review
  19. Article
  20. Evaluation ofFrontiers in plant science · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Young Soo KimDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea.
Younmi LeeDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea.
Wonsu CheonDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea.
Jungwook ParkDepartment of Microbiology, Pusan National University, Pusan, 46241, Republic of Korea.
Hyeok-Tae KwonDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea.
Kotnala BalarajuAgricultural Science & Technology Research Institute, Andong National University, Andong, 36729, Republic of Korea.
Jungyeon KimDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea.
Yeo Jun YoonResearch Department, KOREABIO Co., Ltd., Hwaseong, 18514, Republic of Korea.
Yongho JeonDepartment of Plant Medicals, Andong National University, Andong, 36729, Republic of Korea. yongbac@andong.ac.kr.
Andong National University · KRJusung Engineering (South Korea) · KRPusan National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus genus produces several secondary metabolites with biocontrol ability against various phytopathogens. Bacillus velezensis AK-0 (AK-0), an antagonistic strain isolated from Korean ginseng rhizospheric soil, was found to exhibit antagonistic activity against several phytopathogens. To further display the genetic mechanism of the biocontrol traits of AK-0, we report the complete genome sequence of AK-0 and compared it with complete genome sequences of closely related strains. We report the biocontrol activity of AK-0 against apple bitter rot caused by Colletotrichum gloeosporioides, which could lead to commercialization of this strain as a microbial biopesticide in Korea. To retain its biocontrol efficacy for a longer period, AK-0 has been formulated with ingredients for commercialization, named AK-0 product formulation (AK-0PF). AK-0PF played a role in the suppression of the mycelial growth of the fungicide-resistant pathogen C. gloeosporioides YCHH4 at a greater level than the non-treated control. Moreover, AK-0PF exhibited greater disease suppression of bitter rot in matured under field conditions. Here, we report the complete genome sequence of the AK-0 strain, which has a 3,969,429 bp circular chromosome with 3808 genes and a G+C content of 46.5%. The genome sequence of AK-0 provides a greater understanding of the Bacillus species, which displays biocontrol activity via secondary metabolites. The genome has eight potential secondary metabolite biosynthetic clusters, among which, ituD and bacD genes were expressed at a greater level than other genes. This work provides a better understanding of the strain AK-0, as an effective biocontrol agent (BCA) against phytopathogens, including bitter rot in apple.

Indexed as

Genome, BacterialAntifungal AgentsBacillusBiological Control AgentsChromosome MappingColletotrichumMalusPlant DiseasesAntifungal AgentsBiological Control Agents

Identifiers

PMID33436839
PMCPMC7804190
OpenAlexW3119218898

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.