Evidence map›Paper›PMID 33436639›Full record

ArticleNature communications2021

Structural basis of malaria parasite phenylalanine tRNA-synthetase inhibition by bicyclic azetidines.

Manmohan Sharma, Nipun Malhotra, Manickam Yogavel, Karl Harlos, Bruno Melillo, Eamon Comer, Arthur Gonse, Suhel Parvez, Branko Mitasev, Francis G Fang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Structure-Guided Optimization of Novel Inhibitors ofJournal of medicinal chemistry · 2026
    Article
  2. Article
  3. Improved Bicyclic Pyrrolidine Analogues InhibitJournal of medicinal chemistry · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Bicyclic Pyrrolidine Inhibitors ofACS infectious diseases · 2024
    Article
  10. Bicyclic pyrrolidine inhibitors ofbioRxiv : the preprint server for biology · 2024
    Article
  11. Antimalarial drug discovery: progress and approaches.Nature reviews. Drug discovery · 2023
    Review
  12. Article
  13. Review
  14. Article
  15. New targets for antimalarial drug discovery.Current opinion in microbiology · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Manmohan SharmaMolecular Medicine, Structural Parasitology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India.
Nipun MalhotraMolecular Medicine, Structural Parasitology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India.
Manickam YogavelMolecular Medicine, Structural Parasitology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India.
Karl HarlosDivision of Structural Biology, Welcome Centre for Human Genetics, University of Oxford, Oxford, OX3 7BN, England.ORCID 0000-0002-7266-4354
Bruno MelilloChemical Biology and Therapeutics Science Program, Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA, 02142, USA.ORCID 0000-0002-9708-5287
Eamon ComerChemical Biology and Therapeutics Science Program, Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA, 02142, USA.
Arthur GonseChemical Biology and Therapeutics Science Program, Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA, 02142, USA.
Suhel ParvezDepartment of Medical Elementology and Toxicology, School of Chemical and Life Sciences, Jamia Hamdard, New Delhi, 110062, India.ORCID 0000-0002-6318-6506
Branko MitasevEisai Inc., 35 Cambridgepark Drive Suite 200, Cambridge, MA, 02140, USA.
Francis G FangEisai Inc., 35 Cambridgepark Drive Suite 200, Cambridge, MA, 02140, USA.
Stuart L SchreiberChemical Biology and Therapeutics Science Program, Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, MA, 02142, USA.ORCID 0000-0003-1922-7558
Amit SharmaMolecular Medicine, Structural Parasitology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, 110067, India. directornimr@gmail.com.
Broad Institute · USInternational Centre for Genetic Engineering and Biotechnology · INEisai (United States) · USJamia Hamdard · INCentre for Human Genetics · GB

Funding

Studies of Materials with Physiological PropertiesR35GM127045 · NIGMS · BROAD INSTITUTE, INC. · PI SCHREIBER, STUART L · 2018 to 2022
$3.2M
6 · The paper itself

Abstract

The inhibition of Plasmodium cytosolic phenylalanine tRNA-synthetase (cFRS) by a novel series of bicyclic azetidines has shown the potential to prevent malaria transmission, provide prophylaxis, and offer single-dose cure in animal models of malaria. To date, however, the molecular basis of Plasmodium cFRS inhibition by bicyclic azetidines has remained unknown. Here, we present structural and biochemical evidence that bicyclic azetidines are competitive inhibitors of L-Phe, one of three substrates required for the cFRS-catalyzed aminoacylation reaction that underpins protein synthesis in the parasite. Critically, our co-crystal structure of a PvcFRS-BRD1389 complex shows that the bicyclic azetidine ligand binds to two distinct sub-sites within the PvcFRS catalytic site. The ligand occupies the L-Phe site along with an auxiliary cavity and traverses past the ATP binding site. Given that BRD1389 recognition residues are conserved amongst apicomplexan FRSs, this work lays a structural framework for the development of drugs against both Plasmodium and related apicomplexans.

Indexed as

Amino Acid SequenceAminoacylationAnimalsAzetidinesCatalytic DomainCytosolDrug ResistanceEnzyme InhibitorsMalariaModels, MolecularMutationParasitesPhenylalaninePhenylalanine-tRNA LigasePlasmodium falciparumazetidineAzetidinesEnzyme InhibitorsPhenylalaninePhenylalanine-tRNA Ligase

Identifiers

PMID33436639
PMCPMC7803973
OpenAlexW3120462569

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.