Evidence map›Paper›PMID 33436020›Full record

ArticleVirology journal2021

Study on suitable analysis method for HIV-1 non-catalytic integrase inhibitor.

Ki Hoon Park, Minjee Kim, Seoung Eun Bae, Hee Jung Lee, Kyung-Chang Kim, Byeong Sun Choi, Young Bong Kim

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ki Hoon ParkDepartment of Bio-Industrial Technologies, College of Animal Bioscience and Technology, Konkuk University, Seoul, Korea.
Minjee KimDepartment of Biomedical Science and Engineering, College of Animal Bioscience and Technology, Konkuk University, Seoul, Korea.
Seoung Eun BaeDepartment of Biomedical Science and Engineering, College of Animal Bioscience and Technology, Konkuk University, Seoul, Korea.
Hee Jung LeeDepartment of Biomedical Science and Engineering, College of Animal Bioscience and Technology, Konkuk University, Seoul, Korea.
Kyung-Chang KimDivision of AIDS, Center for Immunology and Pathology, Korea National Institute of Health, Osong, Chungcheongbuk, Korea.
Byeong Sun ChoiDivision of AIDS, Center for Immunology and Pathology, Korea National Institute of Health, Osong, Chungcheongbuk, Korea.
Young Bong KimDepartment of Bio-Industrial Technologies, College of Animal Bioscience and Technology, Konkuk University, Seoul, Korea. kimera@konkuk.ac.kr.ORCID 0000-0003-1681-5557
Konkuk University · KRKorea National Institute of Health · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIntegrase (IN) is an essential protein for HIV replication that catalyzes insertion of the reverse-transcribed viral genome into the host chromosome during the early steps of viral infection. Highly active anti-retroviral therapy is a HIV/AIDS treatment method that combines three or more antiviral drugs often formulated from compounds that inhibit the activities of viral reverse transcriptase and protease enzymes. Early IN inhibitors (INIs) mainly serve as integrase strand transfer inhibitors (INSTI) that disrupt strand transfer by binding the catalytic core domain of IN. However, mutations of IN can confer resistance to INSTI. Therefore, non-catalytic integrase inhibitors (NCINI) have been developed as next-generation INIs.

methodsIn this study, we evaluated and compared the activity of INSTI and NCINI according to the analysis method. Antiviral activity was compared using p24 ELISA with MT2 cell and TZM-bl luciferase system with TZM-bl cell. Each drug was serially diluted and treated to MT2 and TZM-b1 cells, infected with HIV-1 AD8 strain and incubated for 5 and 2 days, respectively. Additionally, to analyze properties of INSTI and NCINI, transfer inhibition assay and 3'-processing inhibition assay were performed.

resultsDuring screening of INIs using the p24 ELISA and TZM-bl luciferase systems, we found an inconsistent result with INSTI and NCINI drugs. Following infection of MT2 and TZM-bl cells with T-tropic HIV-1 strain, both INSTI and NCINI treatments induced significant p24 reduction in MT2 cells. However, NCINI showed no antiviral activity in the TZM-bl luciferase system, indicating that this widely used and convenient antiretroviral assay is not suitable for screening of NCINI compounds that target the second round of HIV-1 replication.

conclusionAccordingly, we recommend application of other assay procedures, such as p24 ELISA or reverse transcription activity, in lieu of the TZM-bl luciferase system for preliminary NCINI drug screening. Utilization of appropriate analytical methods based on underlying mechanisms is necessary for accurate assessment of drug efficacy.

Indexed as

Anti-HIV AgentsCell LineHigh-Throughput Nucleotide SequencingHIV-1HIV InfectionsHIV IntegraseHIV Integrase InhibitorsHumansVirus ReplicationAnti-HIV AgentsHIV IntegraseHIV Integrase Inhibitorsp31 integrase protein, Human immunodeficiency virus 1Anti-HIV drugHIV-1IntegraseNon-catalytic integrase inhibitorScreening method

Identifiers

PMID33436020
PMCPMC7805210
OpenAlexW3111289302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.