Evidence map›Paper›PMID 33435333›Full record

ArticleInternational journal of molecular sciences2021

Transposable Elements and Teleost Migratory Behaviour.

Elisa Carotti, Federica Carducci, Adriana Canapa, Marco Barucca, Samuele Greco, Marco Gerdol, Maria Assunta Biscotti

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. LTR Retroelements and Bird Adaptation to Arid Environments.International journal of molecular sciences · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. The Role of Transposable Elements in Sexual Development.Frontiers in behavioral neuroscience · 2022
    Review
  11. Cells · 2021
    Review
  12. Transposable Elements and Stress in Vertebrates: An Overview.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Elisa CarottiDepartment of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy.
Federica CarducciDepartment of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy.
Adriana CanapaDepartment of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy.
Marco BaruccaDepartment of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy.ORCID 0000-0002-0869-3214
Samuele GrecoDepartment of Life Sciences, University of Trieste, Via L. Giorgieri, 5-34127 Trieste, Italy.ORCID 0000-0003-3435-2656
Marco GerdolDepartment of Life Sciences, University of Trieste, Via L. Giorgieri, 5-34127 Trieste, Italy.ORCID 0000-0001-6411-0813
Maria Assunta BiscottiDepartment of Life and Environmental Sciences, Polytechnic University of Marche, Via Brecce Bianche, 60131 Ancona, Italy.ORCID 0000-0003-3114-240X

Funding

Ministero dell'Istruzione, dell'Università e della Ricerca 040017_R.SCIENT.A_2018
6 · The paper itself

Abstract

Transposable elements (TEs) represent a considerable fraction of eukaryotic genomes, thereby contributing to genome size, chromosomal rearrangements, and to the generation of new coding genes or regulatory elements. An increasing number of works have reported a link between the genomic abundance of TEs and the adaptation to specific environmental conditions. Diadromy represents a fascinating feature of fish, protagonists of migratory routes between marine and freshwater for reproduction. In this work, we investigated the genomes of 24 fish species, including 15 teleosts with a migratory behaviour. The expected higher relative abundance of DNA transposons in ray-finned fish compared with the other fish groups was not confirmed by the analysis of the dataset considered. The relative contribution of different TE types in migratory ray-finned species did not show clear differences between oceanodromous and potamodromous fish. On the contrary, a remarkable relationship between migratory behaviour and the quantitative difference reported for short interspersed nuclear (retro)elements (SINEs) emerged from the comparison between anadromous and catadromous species, independently from their phylogenetic position. This aspect is likely due to the substantial environmental changes faced by diadromous species during their migratory routes.

Indexed as

Animal MigrationDNA Transposable ElementsEvolution, MolecularAnimalsFishesGenome SizePhylogenyShort Interspersed Nucleotide ElementsDNA Transposable Elementsenvironmental adaptationfishgenome evolutiontransposable elements

Identifiers

PMID33435333
PMCPMC7827017

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.