Evidence map›Paper›PMID 33433199›Full record

ArticleJournal of the American Chemical Society2021

Steric-Free Bioorthogonal Labeling of Acetylation Substrates Based on a Fluorine-Thiol Displacement Reaction.

Zhigang Lyu, Yue Zhao, Zakey Yusuf Buuh, Nicole Gorman, Aaron R Goldman, Md Shafiqul Islam, Hsin-Yao Tang, Rongsheng E Wang

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Fluorine-Thiol Displacement Stapling on the Disordered αSynlett : accounts and rapid communications in synthetic organic chemistry · 2025
    Article
  5. Article
  6. Article
  7. Synthetic Advantages of Defluorinative C-F Bond Functionalization.Angewandte Chemie (International ed. in English) · 2023
    Review
  8. Promiscuous Enzymes for Residue-Specific Peptide and Protein Late-Stage Functionalization.Chembiochem : a European journal of chemical biology · 2023
    Review
  9. Article
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Zhigang LyuDepartment of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, Pennsylvania 19122, United States.ORCID 0000-0002-6903-3965
Yue ZhaoDepartment of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, Pennsylvania 19122, United States.
Zakey Yusuf BuuhDepartment of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, Pennsylvania 19122, United States.
Nicole GormanProteomics and Metabolomics Facility, The Wistar Institute, Philadelphia, Pennsylvania 19104, United States.
Aaron R GoldmanProteomics and Metabolomics Facility, The Wistar Institute, Philadelphia, Pennsylvania 19104, United States.ORCID 0000-0001-7605-9592
Md Shafiqul IslamDepartment of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, Pennsylvania 19122, United States.
Hsin-Yao TangProteomics and Metabolomics Facility, The Wistar Institute, Philadelphia, Pennsylvania 19104, United States.
Rongsheng E WangDepartment of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, Pennsylvania 19122, United States.ORCID 0000-0002-5749-7447
Temple University · USThe Wistar Institute · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Eric Andrew Ross · 1985 to 2026
$138.8M
Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
Steric-free labeling strategies to study disease-related non-histone substrates of post-translational modificationsR35GM133468 · NIGMS · TEMPLE UNIV OF THE COMMONWEALTH · PI Ross Wang · 2019 to 2026
$2.9M
Advancing Cancer Research through Comprehensive Proteomics and Metabolomics AnalysesR50CA221838 · NCI · WISTAR INSTITUTE · PI Hsin-Yao Tang · 2017 to 2026
$2.1M
Purchase of a Q Exactive HF mass spectrometer system for metabolomicsS10OD023586 · OD · WISTAR INSTITUTE · PI SPEICHER, DAVID W. · 2017 to 2017
$600k
NCI NIH HHS P30 CA006927NCI NIH HHS P30 CA010815NCI NIH HHS R50 CA221838NIGMS NIH HHS R35 GM133468NIH HHS S10 OD023586
6 · The paper itself

Abstract

We have developed a novel bioorthogonal reaction that can selectively displace fluorine substitutions alpha to amide bonds. This fluorine-thiol displacement reaction (FTDR) allows for fluorinated cofactors or precursors to be utilized as chemical reporters, hijacking acetyltransferase-mediated acetylation both in vitro and in live cells, which cannot be achieved with azide- or alkyne-based chemical reporters. The fluoroacetamide labels can be further converted to biotin or fluorophore tags using FTDR, enabling the general detection and imaging of acetyl substrates. This strategy may lead to a steric-free labeling platform for substrate proteins, expanding our chemical toolbox for functional annotation of post-translational modifications in a systematic manner.

Indexed as

AcetylationAcetyl Coenzyme AAcetyltransferasesBiotinFluorescent DyesHEK293 CellsHumansMolecular ProbesMolecular StructureProof of Concept StudyRhodaminesSulfhydryl Compounds5-carboxytetramethylrhodamine succinimidyl esterAcetyl Coenzyme AAcetyltransferasesBiotinFluorescent Dyesfluoroacetyl-coenzyme AMolecular ProbesRhodaminesSulfhydryl Compounds

Identifiers

PMID33433199
PMCPMC8300487
OpenAlexW3120453267

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.