Evidence map›Paper›PMID 33432376›Full record

ArticleArchives of microbiology2021

Use of RNAi as a preliminary tool for screening putative receptors of nematicidal toxins from Bacillus thuringiensis.

Mónica García-Montelongo, Sebastián E González-Villarreal, Ma Cristina Del Rincón-Castro, Jorge E Ibarra

Abstract read
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In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mónica García-MontelongoDepartamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados del IPN, Apartado postal 629, 36500, Irapuato, Guanajuato, Mexico.
Sebastián E González-VillarrealDepartamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados del IPN, Apartado postal 629, 36500, Irapuato, Guanajuato, Mexico.
Ma Cristina Del Rincón-CastroDivisión de Ciencias de la Vida, Departamento de Alimentos, Universidad de Guanajuato, 36500, Irapuato, Guanajuato, Mexico.
Jorge E IbarraDepartamento de Biotecnología y Bioquímica, Centro de Investigación y de Estudios Avanzados del IPN, Apartado postal 629, 36500, Irapuato, Guanajuato, Mexico. jorge.ibarra@cinvestav.mx.ORCID http://orcid.org/0000-0002-1013-8260
Instituto Politécnico Nacional · MXUniversidad de Guanajuato · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus thuringiensis is a potential control agent for plant-parasitic nematodes. Nematode intestinal receptors for Cry21-type toxins are poorly known. Therefore, a strategy was tested as a primary screening tool to find possible Cry toxin receptors, using a nematicidal Bt strain and the RNAi technique on Caenorhabditis elegans. Six genes encoding intestinal membrane proteins were selected (abt-4, bre-1, bre-2, bre-3, asps-1, abl-1) as possible targets for Cry proteins. Fractions of each selected gene were amplified by PCR. Amplicons were cloned into the L4440 vector to transform the E. coli HT155 (DE3) strain. Transformed bacteria were used to silence the selected genes using the RNAi feeding method. Nematodes with silenced genes were tested with the Bt strain LBIT-107, which harbors the nematicidal protein Cry21Aa3, among others. Results indicated that nematodes with the silenced abt-4 gene were 69.5% more resistant to the LBIT-107 strain, in general, and 79% to the Cry21Aa3 toxin, specifically.

Indexed as

Antinematodal AgentsBacillus thuringiensis ToxinsCaenorhabditis elegansRNA InterferenceAnimalsBacillus thuringiensisEscherichia coliMembrane ProteinsAntinematodal AgentsBacillus thuringiensis ToxinsMembrane ProteinsB. thuringiensisC. elegansMode of actionNematicidalReceptor proteinRNAi

Identifiers

PMID33432376
OpenAlexW3120463292

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.