Evidence map›Paper›PMID 33432194›Full record

ArticleNature neuroscience2021

Large mosaic copy number variations confer autism risk.

Maxwell A Sherman, Rachel E Rodin, Giulio Genovese, Caroline Dias, Alison R Barton, Ronen E Mukamel, Bonnie Berger, Peter J Park, Christopher A Walsh, Po-Ru Loh

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 2 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 2 syntheses or guidelines pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Disease insights from brain somatic mosaicism.Experimental & molecular medicine · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Somatic Mosaicism in Brain Disorders.Annual review of pathology · 2025
    Review
  14. Review
  15. Molecular diagnosis of 405 individuals with autism spectrum disorder.European journal of human genetics : EJHG · 2024
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Maxwell A ShermanComputer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA. maxas@mit.edu.ORCID http://orcid.org/0000-0002-5297-9252
Rachel E RodinDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Giulio GenoveseBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-3066-5575
Caroline DiasDivision of Genetics and Genomics, Manton Center for Orphan Disease, and Howard Hughes Medical Institute, Boston Children's Hospital, Boston, MA, USA.
Alison R BartonDivision of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0882-0196
Ronen E MukamelDivision of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
Bonnie BergerComputer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA, USA.
Peter J ParkDepartment of Biomedical Informatics, Harvard Medical School, Boston, MA, USA. peter_park@hms.harvard.edu.ORCID http://orcid.org/0000-0001-9378-960X
Christopher A WalshBroad Institute of MIT and Harvard, Cambridge, MA, USA. christopher.walsh@childrens.harvard.edu.ORCID http://orcid.org/0000-0002-0156-2238
Po-Ru LohDivision of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA. poruloh@broadinstitute.org.ORCID http://orcid.org/0000-0001-5542-9064
Broad Institute · USBoston Children's Hospital · USHarvard University · USMassachusetts Institute of Technology · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
African Ancestry Genomic Psychiatry CohortR01MH104964 · NIMH · SUNY DOWNSTATE MEDICAL CENTER · PI BIGDELI, TIM BERNARD, FANOUS, AYMAN H · 2015 to 2024
$16.7M
Training Program in Bioinformatics and Integrative GenomicsT32HG002295 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Peter J Park · 2001 to 2026
$15.8M
Cell Identity Determination In Human Brain: Somatic Mutation and Cell LineageR01NS032457 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI Alice Eunjung Lee, Christopher A. Walsh · 1995 to 2026
$12.7M
1/2-Somatic mosaicism and autism spectrum disorderU01MH106883 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI PARK, PETER J, WALSH, CHRISTOPHER A. · 2015 to 2019
$9.2M
Structurally complex genome loci in human populations and human phenotypesR01HG006855 · NHGRI · HARVARD MEDICAL SCHOOL · PI Steven Andrew McCarroll · 2012 to 2026
$8.2M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI POMEROY, SCOTT LOREN · 2016 to 2020
$5.2M
Revealing somatic genome alterations and their clinical sequelae: Ultrasensitive computational detection of mosaic structural variantsDP2ES030554 · NIEHS · BRIGHAM AND WOMEN'S HOSPITAL · PI LOH, PO-RU · 2018 to 2018
$2.7M
Translational Post-doctoral Training in NeurodevelopmentT32MH112510 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI DAVID C GLAHN, CHARLES Alexander NELSON · 2017 to 2026
$2.6M
Compressive genomics for large omics data sets: Algorithms applications & toolsR01GM108348 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BERGER, BONNIE · 2013 to 2019
$2.1M
Exploring the role of genomic repeats in cardiovascular disease heritabilityK25HL150334 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI MUKAMEL, RONEN · 2020 to 2024
$783k
Exploring the role of genetic structural variation in neuropsychiatric diseasesF31MH124393 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SHERMAN, MAXWELL AARON · 2020 to 2022
$109k
National Science Foundation (NSF) DMS-1939015NHGRI NIH HHS R01 HG006855NHGRI NIH HHS T32 HG002295NHLBI NIH HHS K25 HL150334NICHD NIH HHS U54 HD090255NIEHS NIH HHS DP2 ES030554NIGMS NIH HHS R01 GM108348NIGMS NIH HHS T32 GM007753NIMH NIH HHS F31 MH124393NIMH NIH HHS R01 MH104964NIMH NIH HHS T32 MH112510NIMH NIH HHS U01 MH106883NINDS NIH HHS R01 NS032457U.S. Department of Health & Human Services | National Institutes of Health (NIH) DP2ES030554U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) K25HL150334U.S. Department of Health & Human Services | NIH | National Human Genome Research Institute (NHGRI) R01HG006855U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM108348U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM007753U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) F31MH124393U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) R01MH104964U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) T32MH112510U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) U01MH106883
6 · The paper itself

Abstract

Although germline de novo copy number variants (CNVs) are known causes of autism spectrum disorder (ASD), the contribution of mosaic (early-developmental) copy number variants (mCNVs) has not been explored. In this study, we assessed the contribution of mCNVs to ASD by ascertaining mCNVs in genotype array intensity data from 12,077 probands with ASD and 5,500 unaffected siblings. We detected 46 mCNVs in probands and 19 mCNVs in siblings, affecting 2.8-73.8% of cells. Probands carried a significant burden of large (>4-Mb) mCNVs, which were detected in 25 probands but only one sibling (odds ratio = 11.4, 95% confidence interval = 1.5-84.2, P = 7.4 × 10

Indexed as

DNA Copy Number VariationsMosaicismAdultAutism Spectrum DisorderAutopsyBrain ChemistryChildChild Development Disorders, PervasiveCohort StudiesGenetic Predisposition to DiseaseGenotypeGerm-Line MutationHumansRisk AssessmentTissue Banks

Identifiers

PMID33432194
PMCPMC7854495
OpenAlexW3119206362

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.