Evidence map›Paper›PMID 33431991›Full record

ArticleScientific reports2021

Ascending dorsal column sensory neurons respond to spinal cord injury and downregulate genes related to lipid metabolism.

Eric E Ewan, Oshri Avraham, Dan Carlin, Tassia Mangetti Gonçalves, Guoyan Zhao, Valeria Cavalli

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Three-dimensional chromatin mapping of sensory neurons reveals that promoter-enhancer looping is required for axonal regeneration.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Spinal cord injury: molecular mechanisms and therapeutic interventions.Signal transduction and targeted therapy · 2023
    Review
  10. Article
  11. Self-renewing macrophages in dorsal root ganglia contribute to promote nerve regeneration.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Eric E EwanDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA.
Oshri AvrahamDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA.
Dan CarlinDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA.
Tassia Mangetti GonçalvesDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA.
Guoyan ZhaoDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA.
Valeria CavalliDepartment of Neuroscience, Washington University School of Medicine, 660 S. Euclid Ave, Campus Box 8108, St. Louis, MO, 63110-1093, USA. cavalli@wustl.edu.
Washington University in St. Louis · USHope Center for Neurological Disorders · US

Funding

MECHANISMS OF CHROMATIN REMODELING PROMOTING AXON REGENERATIONR01NS096034 · NINDS · WASHINGTON UNIVERSITY · PI CAVALLI, VALERIA · 2016 to 2020
$1.7M
MICROTUBULE POST-TRANSLATIONAL MODIFICATIONS IN AXON REGENERATIONR01NS082446 · NINDS · WASHINGTON UNIVERSITY · PI CAVALLI, VALERIA · 2013 to 2017
$1.7M
Functional role of satellite glial cells in axon regenerationR01NS111719 · NINDS · WASHINGTON UNIVERSITY · PI CAVALLI, VALERIA · 2020 to 2021
$885k
NINDS NIH HHS R01 NS082446NINDS NIH HHS R01 NS096034NINDS NIH HHS R01 NS111719
6 · The paper itself

Abstract

Regeneration failure after spinal cord injury (SCI) results in part from the lack of a pro-regenerative response in injured neurons, but the response to SCI has not been examined specifically in injured sensory neurons. Using RNA sequencing of dorsal root ganglion, we determined that thoracic SCI elicits a transcriptional response distinct from sciatic nerve injury (SNI). Both SNI and SCI induced upregulation of ATF3 and Jun, yet this response failed to promote growth in sensory neurons after SCI. RNA sequencing of purified sensory neurons one and three days after injury revealed that unlike SNI, the SCI response is not sustained. Both SCI and SNI elicited the expression of ATF3 target genes, with very little overlap between conditions. Pathway analysis of differentially expressed ATF3 target genes revealed that fatty acid biosynthesis and terpenoid backbone synthesis were downregulated after SCI but not SNI. Pharmacologic inhibition of fatty acid synthase, the enzyme generating palmitic acid, decreased axon growth and regeneration in vitro. These results support the notion that decreased expression of lipid metabolism-related genes after SCI, including fatty acid synthase, may restrict axon regenerative capacity after SCI.

Indexed as

Spinal Cord InjuriesAnimalsCells, CulturedDown-RegulationEmbryo, MammalianFemaleGanglia, SpinalLipid MetabolismMiceMice, Inbred C57BLNerve RegenerationSensory Receptor CellsSpinal CordSpinal Nerve Roots

Identifiers

PMID33431991
PMCPMC7801468
OpenAlexW3118361371

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.