Evidence map›Paper›PMID 33431904›Full record

ArticleScientific reports2021

Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays).

Katherine M Murphy, Joseph Edwards, Katherine B Louie, Benjamin P Bowen, Venkatesan Sundaresan, Trent R Northen, Philipp Zerbe

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
11.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 60 citations in OpenAlex.

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  15. Bacterial tolerance to host-exuded specialized metabolites structures the maize root microbiome.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Katherine M MurphyDepartment of Plant Biology, University of California-Davis, One Shields Avenue, Davis, CA, USA. kmmurphy@ucdavis.edu.ORCID 0000-0002-8891-4274
Joseph EdwardsIntegrative Biology, University of Texas, Austin, 2405 Speedway, Austin, TX, USA.
Katherine B LouieJoint Genome Institute, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA, 94720, USA.
Benjamin P BowenEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, M/S 100PFG100, 1 Cyclotron Road, Berkeley, CA, 94720, USA.
Venkatesan SundaresanDepartment of Plant Biology, University of California-Davis, One Shields Avenue, Davis, CA, USA.
Trent R NorthenEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, M/S 100PFG100, 1 Cyclotron Road, Berkeley, CA, 94720, USA.
Philipp ZerbeDepartment of Plant Biology, University of California-Davis, One Shields Avenue, Davis, CA, USA.
Lawrence Berkeley National Laboratory · USUniversity of California, Davis · USThe University of Texas at Austin · US

Funding

Orthocoding for Spatial SequencingR56HG011231 · NHGRI · STANFORD UNIVERSITY · PI FORDYCE, POLLY MORRELL, ROHATGI, RAJAT · 2020 to 2020
$394k
6 · The paper itself

Abstract

Plants deploy both primary and species-specific, specialized metabolites to communicate with other organisms and adapt to environmental challenges, including interactions with soil-dwelling microbial communities. However, the role of specialized metabolites in modulating plant-microbiome interactions often remains elusive. In this study, we report that maize (Zea mays) diterpenoid metabolites with known antifungal bioactivities also influence rhizosphere bacterial communities. Metabolite profiling showed that dolabralexins, antibiotic diterpenoids that are highly abundant in roots of some maize varieties, can be exuded from the roots. Comparative 16S rRNA gene sequencing determined the bacterial community composition of the maize mutant Zman2 (anther ear 2), which is deficient in dolabralexins and closely related bioactive kauralexin diterpenoids. The Zman2 rhizosphere microbiome differed significantly from the wild-type sibling with the most significant changes observed for Alphaproteobacteria of the order Sphingomonadales. Metabolomics analyses support that these differences are attributed to the diterpenoid deficiency of the Zman2 mutant, rather than other large-scale metabolome alterations. Together, these findings support physiological functions of maize diterpenoids beyond known chemical defenses, including the assembly of the rhizosphere microbiome.

Indexed as

MicrobiotaAntifungal AgentsBacteriaDiterpenesPlant RootsRhizosphereZea maysAntifungal AgentsDiterpenes

Identifiers

PMID33431904
PMCPMC7801432
OpenAlexW3119955186

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.