Evidence map›Paper›PMID 33430967›Full record

ArticleJournal of cheminformatics2019

Machine learning models for hydrogen bond donor and acceptor strengths using large and diverse training data generated by first-principles interaction free energies.

Christoph A Bauer, Gisbert Schneider, Andreas H Göller

Abstract read
In one paragraph

Article in Journal of cheminformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. pKalculator: A pBeilstein journal of organic chemistry · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Solubility improvement of atorvastatin using deep eutectic solvents.Journal of advanced pharmaceutical technology & research
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Christoph A BauerDepartment of Chemistry and Applied Biosciences, Swiss Federal Institute of Technology (ETH), 8093, Zurich, Switzerland.ORCID http://orcid.org/0000-0002-6035-6944
Gisbert SchneiderDepartment of Chemistry and Applied Biosciences, Swiss Federal Institute of Technology (ETH), 8093, Zurich, Switzerland. gisbert.schneider@pharma.ethz.ch.ORCID http://orcid.org/0000-0001-6706-1084
Andreas H GöllerBayer AG, Pharmaceuticals, R&D, 42096, Wuppertal, Germany. andreas.goeller@bayer.com.ORCID http://orcid.org/0000-0003-4343-4063

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present machine learning (ML) models for hydrogen bond acceptor (HBA) and hydrogen bond donor (HBD) strengths. Quantum chemical (QC) free energies in solution for 1:1 hydrogen-bonded complex formation to the reference molecules 4-fluorophenol and acetone serve as our target values. Our acceptor and donor databases are the largest on record with 4426 and 1036 data points, respectively. After scanning over radial atomic descriptors and ML methods, our final trained HBA and HBD ML models achieve RMSEs of 3.8 kJ mol

Indexed as

CheminformaticsComputational chemistryDensity functional theoryFree energy predictionHydrogen bond strength

Identifiers

PMID33430967
PMCPMC6737620

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.