Evidence map›Paper›PMID 33425253›Full record

ReviewComputational and structural biotechnology journal2021

Advances in integrative structural biology: Towards understanding protein complexes in their cellular context.

Samantha J Ziegler, Sam J B Mallinson, Peter C St John, Yannick J Bomble

Abstract readReview
In one paragraph

Review in Computational and structural biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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  14. Phytochemicals in Drug Discovery-A Confluence of Tradition and Innovation.International journal of molecular sciences · 2024
    Review
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  18. Docking-based long timescale simulation of cell-size protein systems at atomic resolution.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Samantha J ZieglerBiosciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO 80401, USA.
Sam J B MallinsonBiosciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO 80401, USA.
Peter C St JohnBiosciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO 80401, USA.
Yannick J BombleBiosciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO 80401, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microorganisms rely on protein interactions to transmit signals, react to stimuli, and grow. One of the best ways to understand these protein interactions is through structural characterization. However, in the past, structural knowledge was limited to stable, high-affinity complexes that could be crystallized. Recent developments in structural biology have revolutionized how protein interactions are characterized. The combination of multiple techniques, known as integrative structural biology, has provided insight into how large protein complexes interact in their native environment. In this mini-review, we describe the past, present, and potential future of integrative structural biology as a tool for characterizing protein interactions in their cellular context.

Indexed as

CLEM, correlated light and electron microscopyCrosslinking mass spectrometryCryo-electron microscopyCryo-electron tomographycryo-EM, cryo-electron microscopycryo-EM SPA, cryo-EM single particle analysiscryo-ET, cryo-electron tomographyEPR, electron paramagnetic resonanceFRET, Forster resonance energy transferIntegrative structural biologyISB, Integrative structural biologyML, machine learningMR, molecular replacementMSAs, multiple sequence alignmentsMX, macromolecular crystallographyNMR, nuclear magnetic resonancePDB, Protein Data BankProtein dockingProtein structure predictionQuinary interactionsSAD, single-wavelength anomalous dispersionSANS, small angle neutron scatteringSAXS, small angle X-ray scatteringXL-MS, cross-linking mass spectrometryX-ray crystallography

Identifiers

PMID33425253
PMCPMC7772369

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.