Evidence map›Paper›PMID 33422115›Full record

ArticleInfectious agents and cancer2021

Global expression of noncoding RNome reveals dysregulation of small RNAs in patients with HTLV-1-associated adult T-cell leukemia: a pilot study.

Andrezza Nascimento, Daniela Raguer Valadão de Souza, Rodrigo Pessôa, Anna Julia Pietrobon, Youko Nukui, Juliana Pereira, Jorge Casseb, Augusto César Penalva de Oliveira, Paula Loureiro, Alberto José da Silva Duarte and 2 more

Open access · goldAbstract read
In one paragraph

Article in Infectious agents and cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Andrezza NascimentoLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Daniela Raguer Valadão de SouzaLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Rodrigo PessôaLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Anna Julia PietrobonLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Youko NukuiDepartment of Hematology, Faculty of Medicine, University of São Paulo, São Paulo, 05403 000, Brazil.
Juliana PereiraDepartment of Hematology, Faculty of Medicine, University of São Paulo, São Paulo, 05403 000, Brazil.
Jorge CassebLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Augusto César Penalva de OliveiraDepartment of Neurology, Emilio Ribas Institute of Infectious Diseases, São Paulo, 01246-900, Brazil.
Paula LoureiroPernambuco State Center of Hematology and Hemotherapy, Recife, Pernambuco, CEP 52011900, Brazil.
Alberto José da Silva DuarteLaboratory of Dermatology and Immunodeficiency, Department of Dermatology, Instituto de Medicina Tropical de São Paulo, Faculty of Medicine, University of São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 470 3° andar, São Paulo, 05403 000, Brazil.
Patricia Bianca ClissaImmunopathology Laboratory, Butantan Institute, São Paulo, 05503-900, Brazil.
Sabri Saeed SanabaniLaboratory of Medical Investigation Unit 03, Clinics Hospital, Faculty of Medicine, University of São Paulo, São Paulo, 05403 000, Brazil. sabyem_63@yahoo.com.ORCID http://orcid.org/0000-0002-8876-8262
Universidade de São Paulo · BRInstituto Butantan · BRInstituto de Infectologia Emílio Ribas · BR

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2018/08631-3
6 · The paper itself

Abstract

backgroundAdult T cell lymphoma/leukemia (ATLL) is a peripheral T-cell neoplasm caused by human T-cell lymphotropic virus-1 (HTLV-1). Small RNAs (sRNAs), including microRNAs (miRNAs), play a pivotal role in the initiation and development of hematological malignancies and may represent potential therapeutic target molecules. However, little is known about how these molecules impact the pathogenesis of ATLL. In this study, we aimed to identify sRNA expression signatures associated with ATLL and to investigate their potential implication in the pathophysiology of the disease.

methodsSmall-RNAseq analysis was performed in peripheral blood mononuclear cells from HTLV-1- associated ATLL (n = 10) in comparison to asymptomatic carriers (n = 8) and healthy controls (n = 5). Sequencing was carried out using the Illumina MiSeq platform, and the deregulation of selected miRNAs was validated by real-time PCR. Pathway analyses of most deregulated miRNA were performed and their global profiling was combined with transcriptome data in ATLL.

resultsThe sequencing identified specific sRNAs signatures associated with ATLL patients that target pathways relevant in ATLL, such as the transforming growth factor-(βTGF-β), Wnt, p53, apoptosis, and mitogen-activated protein kinase (MAPK) signaling cascades. Network analysis revealed several miRNAs regulating highly connected genes within the ATLL transcriptome. miR-451-3p was the most downregulated miRNA in active patients.

conclusionsOur findings shed light on the expression of specific sRNAs in HTLV-1 associated ATLL, which may represent promising candidates as biomarkers that help monitor the disease activity.

Indexed as

Asymptomatic carriersHTLV-1Massively parallel sequencingSmall RNAT cell antigen receptor

Identifiers

PMID33422115
PMCPMC7797118
OpenAlexW3121095018

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.