Evidence map›Paper›PMID 33422018›Full record

ArticleBMC plant biology2021

Comparative proteomic analysis reveals that the Heterosis of two maize hybrids is related to enhancement of stress response and photosynthesis respectively.

Daoping Wang, Yongying Mu, Xiaojiao Hu, Bo Ma, Zhibo Wang, Li Zhu, Jiang Xu, Changling Huang, Yinghong Pan

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Plant height heterosis is quantitatively associated with expression levels of plastid ribosomal proteins.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Daoping WangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China.
Yongying MuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China.
Xiaojiao HuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China.
Bo MaXiyuan Hospital, China Academy of Chinese Medical Sciences, Beijing, 100091, People's Republic of China.
Zhibo WangXiyuan Hospital, China Academy of Chinese Medical Sciences, Beijing, 100091, People's Republic of China.
Li ZhuBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China.
Jiang XuInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China.
Changling HuangInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China. huangchangling@caas.cn.
Yinghong PanInstitute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, People's Republic of China. panyinghong@caas.cn.
Chinese Academy of Agricultural Sciences · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNInstitute of Crop Sciences · CNBiotechnology Research Institute · CN

Funding

National Key Research and Development Plan 2016YFD0101005
6 · The paper itself

Abstract

backgroundHeterosis refers to superior traits exhibiting in a hybrid when compared with both parents. Generally, the hybridization between parents can change the expression pattern of some proteins such as non-additive proteins (NAPs) which might lead to heterosis. 'Zhongdan808' (ZD808) and 'Zhongdan909' (ZD909) are excellent maize hybrids in China, however, the heterosis mechanism of them are not clear. Proteomics has been wildly used in many filed, and comparative proteomic analysis of hybrid and its parents is helpful for understanding the mechanism of heterosis in the two maize hybrids.

resultsOver 2000 protein groups were quantitatively identified from second seedling leaves of two hybrids and their parents by label-free quantification. Statistical analysis of total identified proteins, differentially accumulated proteins (DAPs) and NAPs of the two hybrids revealed that both of them were more similar to their female parents. In addition, most of DAPs were up-regulated and most of NAPs were high parent abundance or above-high parent abundance in ZD808, while in ZD909, most of DAPs were down-regulated and most of NAPs were low parent abundance or below-low parent abundance. Pathway enrichment analysis showed that more of stress response-related NAPs in ZD808 were high parent abundance or above-high parent abundance, and most of PS related NAPs in ZD909 were high parent abundance or above-high parent abundance. Finally, four stress response-related proteins and eight proteins related to PS were verified by PRM, ten of them had significant differences between hybrid and midparent value.

conclusionsEven though every one of the two hybrids were more similar to its female parent at proteome level, the biological basis of heterosis is different in the two maize hybrids. In comparison with their parents, the excellent agronomic traits of hybrid ZD808 is mainly correlated with the high expression levels of some proteins related to stress responses and metabolic functions, while traits of ZD909 is mainly correlated with high expressed proteins related to photosynthesis. Our proteomics results support previous physiological and morphological research and have provided useful information in understanding the reason of valuable agronomic traits.

Indexed as

Gene Expression ProfilingProteomicsChinaGene Expression Regulation, PlantHybridization, GeneticHybrid VigorPhotosynthesisPlant LeavesStress, PhysiologicalZea maysHeterosisMaizeNon-additive proteinProteomic analysis

Identifiers

PMID33422018
PMCPMC7796551
OpenAlexW3112751771

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.