Evidence map›Paper›PMID 33420666›Full record

ArticlePlanta2021

Clonal sector analysis and cell ablation confirm a function for DORNROESCHEN-LIKE in founder cells and the vasculature in Arabidopsis.

Dorothea Glowa, Petra Comelli, John W Chandler, Wolfgang Werr

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dorothea GlowaDevelopmental Biology, Institute of Zoology, Cologne Biocenter, Cologne University, Zülpicher Straße 47b, 50674, Cologne, Germany.
Petra ComelliDevelopmental Biology, Institute of Zoology, Cologne Biocenter, Cologne University, Zülpicher Straße 47b, 50674, Cologne, Germany.
John W ChandlerDevelopmental Biology, Institute of Zoology, Cologne Biocenter, Cologne University, Zülpicher Straße 47b, 50674, Cologne, Germany.
Wolfgang WerrDevelopmental Biology, Institute of Zoology, Cologne Biocenter, Cologne University, Zülpicher Straße 47b, 50674, Cologne, Germany. werr@uni-koeln.de.ORCID http://orcid.org/0000-0002-6627-1685
University of Cologne · DE

Funding

Deutsche Forschungsgemeinschaft WE 1262/11-2
6 · The paper itself

Abstract

MAIN

conclusionInducible lineage analysis and cell ablation via conditional toxin expression in cells expressing the DORNRÖSCHEN-LIKE transcription factor represent an effective and complementary adjunct to conventional methods of functional gene analysis. Classical methods of functional gene analysis via mutational and expression studies possess inherent limitations, and therefore, the function of a large proportion of transcription factors remains unknown. We have employed two complementary, indirect methods to obtain functional information for the AP2/ERF transcription factor DORNRÖSCHEN-LIKE (DRNL), which is dynamically expressed in flowers and marks lateral organ founder cells. An inducible, two-component Cre-Lox system was used to express beta-glucuronidase GUS in cells expressing DRNL, to perform a sector analysis that reveals lineages of cells that transiently expressed DRNL throughout plant development. In a complementary approach, an inducible system was used to ablate cells expressing DRNL using diphtheria toxin A chain, to visualise the phenotypic consequences. These complementary analyses demonstrate that DRNL functionally marks founder cells of leaves and floral organs. Clonal sectors also included the vasculature of the leaves and petals, implicating a previously unidentified role for DRNL in provasculature development, which was confirmed in cotyledons by closer analysis of drnl mutants. Our findings demonstrate that inducible gene-specific lineage analysis and cell ablation via conditional toxin expression represent an effective and informative adjunct to conventional methods of functional gene analysis.

Indexed as

ArabidopsisArabidopsis ProteinsPlant DevelopmentTranscription FactorsFlowersArabidopsis ProteinsDRNL protein, ArabidopsisTranscription FactorsCell ablationDiphtheria toxin ADORNRÖSCHEN-LIKEFounder cellsSector analysisTranscription factor

Identifiers

PMID33420666
PMCPMC7794208
OpenAlexW3119213002

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.