Evidence map›Paper›PMID 33420663›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2021

Optimization of metabolite extraction and analytical methods from shrimp intestine for metabolomics profile analysis using LC-HRMS/MS.

Umaporn Uawisetwathana, Siwat Plaisen, Sopacha Arayamethakorn, Prapatsorn Jitthiang, Wanilada Rungrassamee

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Article in Metabolomics : Official journal of the Metabolomic Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Umaporn UawisetwathanaMicroarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, 12120, Pathumthani, Thailand. umaporn.uaw@biotec.or.th.ORCID http://orcid.org/0000-0001-6782-7617
Siwat PlaisenMicroarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, 12120, Pathumthani, Thailand.
Sopacha ArayamethakornMicroarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, 12120, Pathumthani, Thailand.
Prapatsorn JitthiangMicroarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, 12120, Pathumthani, Thailand.
Wanilada RungrassameeMicroarray Research Team, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, 12120, Pathumthani, Thailand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionIntestinal microbiota and metabolites play important roles for further improvement of animal production. Metabolomics of shrimp intestine to understand roles and their relationship to the host is hampered by the lack of metabolome profiling method.

objectivesThis study aims to develop extraction and analytical methods to allow accurate metabolic analysis in shrimp intestine.

methodsConditions for extraction and LC-HRMS/MS analysis were optimized.

resultsExtraction with ethyl acetate:acetone (15:2 v/v) acidified with 0.5% acetic acid, elution with acetonitrile:water acidified with 0.01% acetic acid for 25 min, and mass fragmentation at 15% HCD were the optimal conditions, yielding the highest signal intensity and numbers of putative metabolites.

conclusionOur method enabled in-depth study for shrimp-microbial interaction at metabolite level.

Indexed as

IntestinesMetabolomeMetabolomicsAnimalsChromatography, LiquidDecapodaTandem Mass SpectrometryBlack tiger shrimpLC-HRMS/MSMetabolite profilesPenaeus monodonShrimp intestine

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.