Evidence map›Paper›PMID 33420184›Full record

ArticleScientific reports2021

Atomic-level differences between brain parenchymal- and cerebrovascular-seeded Aβ fibrils.

Kathryn P Scherpelz, Songlin Wang, Peter Pytel, Rama S Madhurapantula, Atul K Srivastava, Joseph R Sachleben, Joseph Orgel, Yoshitaka Ishii, Stephen C Meredith

Abstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. In-Cell Sensitivity-Enhanced NMR of Intact Viable Mammalian Cells.Journal of the American Chemical Society · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kathryn P ScherpelzDepartment of Pathology, The University of Chicago, Chicago, IL, 60637, USA.
Songlin WangDepartment of Chemistry, University of Illinois At Chicago, Chicago, IL, 60607, USA.
Peter PytelDepartment of Pathology, The University of Chicago, Chicago, IL, 60637, USA.
Rama S MadhurapantulaDepartment of Biology and Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA.
Atul K SrivastavaDepartment of Pathology, The University of Chicago, Chicago, IL, 60637, USA.
Joseph R SachlebenBiomolecular NMR Facility, The University of Chicago, Chicago, IL, 60637, USA.
Joseph OrgelDepartment of Biology and Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA.
Yoshitaka IshiiSchool of Life Science and Technology, Tokyo Institute of Technology, 4259 Midori-ku, Yokohama, Kanagawa, 226-8503, Japan.
Stephen C MeredithDepartment of Pathology, The University of Chicago, Chicago, IL, 60637, USA. scmeredi@uchicago.edu.

Funding

MEDICAL SCIENTIST TRAININGT32GM007281 · NIGMS · UNIVERSITY OF CHICAGO · PI CLARK, MARCUS RAMSAY · 1985 to 2022
$32.1M
Alzheimer's Brain-Seeded Abeta FibrilsR01AG048793 · NIA · UNIVERSITY OF CHICAGO · PI MEREDITH, STEPHEN C. · 2015 to 2019
$2.1M
NIA NIH HHS R01 AG048793NIGMS NIH HHS T32 GM007281NIH HHS R01AG048793
6 · The paper itself

Abstract

Alzheimer's disease is characterized by neuritic plaques, the main protein components of which are β-amyloid (Aβ) peptides deposited as β-sheet-rich amyloid fibrils. Cerebral Amyloid Angiopathy (CAA) consists of cerebrovascular deposits of Aβ peptides; it usually accompanies Alzheimer's disease, though it sometimes occurs in the absence of neuritic plaques, as AD also occurs without accompanying CAA. Although neuritic plaques and vascular deposits have similar protein compositions, one of the characteristic features of amyloids is polymorphism, i.e., the ability of a single pure peptide to adopt multiple conformations in fibrils, depending on fibrillization conditions. For this reason, we asked whether the Aβ fibrils in neuritic plaques differed structurally from those in cerebral blood vessels. To address this question, we used seeding techniques, starting with amyloid-enriched material from either brain parenchyma or cerebral blood vessels (using meninges as the source). These amyloid-enriched preparations were then added to fresh, disaggregated solutions of Aβ to make replicate fibrils, as described elsewhere. Such fibrils were then studied by solid-state NMR, fiber X-ray diffraction, and other biophysical techniques. We observed chemical shift differences between parenchymal vs. vascular-seeded replicate fibrils in select sites (in particular, Ala2, Phe4, Val12, and Gln15 side chains) in two-dimensional

Indexed as

Amyloid beta-PeptidesBrainHumansProtein AggregatesProtein Conformation, beta-StrandAmyloid beta-PeptidesProtein Aggregates

Identifiers

PMID33420184
PMCPMC7794565

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.