Evidence map›Paper›PMID 33420059›Full record

ArticleScientific reports2021

Hormonal and transcriptional analyses provides new insights into the molecular mechanisms underlying root thickening and isoflavonoid biosynthesis in Callerya speciosa (Champ. ex Benth.) Schot.

Shaochang Yao, Zuzai Lan, Rongshao Huang, Yong Tan, Ding Huang, Jinyuan Gu, Chunliu Pan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  5. Genome-Wide Identification of the bHLH Gene Family inInternational journal of molecular sciences · 2024
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  7. Article
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  9. Article
  10. Article
  11. Review
  12. Article
  13. The Flavonoid Biosynthesis Network in Plants.International journal of molecular sciences · 2021
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Shaochang YaoCollege of Pharmacy, Guangxi University of Chinese Medicine, Nanning, Guangxi, People's Republic of China. yaoshaochang@163.com.
Zuzai LanGuangxi Botanical Garden of Medicinal Plants, Nanning, Guangxi, People's Republic of China.
Rongshao HuangCollege of Pharmacy, Guangxi University of Chinese Medicine, Nanning, Guangxi, People's Republic of China.
Yong TanCollege of Pharmacy, Guangxi University of Chinese Medicine, Nanning, Guangxi, People's Republic of China.
Ding HuangCollege of Pharmacy, Guangxi University of Chinese Medicine, Nanning, Guangxi, People's Republic of China.
Jinyuan GuCollege of Pharmacy, Guangxi University of Chinese Medicine, Nanning, Guangxi, People's Republic of China.
Chunliu PanGuangxi Botanical Garden of Medicinal Plants, Nanning, Guangxi, People's Republic of China. pchunliu@126.com.
Guangxi University of Chinese Medicine · CNGuangxi Medicinal Botanical Garden · CNGuangxi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Callerya speciosa (Champ. ex Benth.) Schot is a traditional Chinese medicine characterized by tuberous roots as the main organ of isoflavonoid accumulation. Root thickening and isoflavonoid accumulation are two major factors for yield and quality of C. speciosa. However, the underlying mechanisms of root thickening and isoflavonoid biosynthesis have not yet been elucidated. Here, integrated morphological, hormonal and transcriptomic analyses of C. speciosa tuberous roots at four different ages (6, 12, 18, 30 months after germination) were performed. The growth cycle of C. speciosa could be divided into three stages: initiation, rapid-thickening and stable-thickening stage, which cued by the activity of vascular cambia. Endogenous changes in phytohormones were associated with developmental changes during root thickening. Jasmonic acid might be linked to the initial development of tuberous roots. Abscisic acid seemed to be essential for tuber maturation, whereas IAA, cis-zeatin and gibberellin 3 were considered essential for rapid thickening of tuberous roots. A total of 4337 differentially expressed genes (DEGs) were identified during root thickening, including 15 DEGs participated in isoflavonoid biosynthesis, and 153 DEGs involved in starch/sucrose metabolism, hormonal signaling, transcriptional regulation and cell wall metabolism. A hypothetical model of genetic regulation associated with root thickening and isoflavonoid biosynthesis in C. speciosa is proposed, which will help in understanding the underlying mechanisms of tuberous root formation and isoflavonoid biosynthesis.

Indexed as

Calcium SignalingFabaceaeGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantIsoflavonesMAP Kinase Signaling SystemMedicine, Chinese TraditionalModels, BiologicalPlant Growth RegulatorsPlant ProteinsPlant RootsPlants, MedicinalStarchSucroseIsoflavonesPlant Growth RegulatorsPlant ProteinsStarchSucroseTranscription Factors

Identifiers

PMID33420059
PMCPMC7794344
OpenAlexW3120374058

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.