Evidence map›Paper›PMID 33420045›Full record

ArticleNPJ systems biology and applications2021

Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Selva Rupa Christinal Immanuel, Avinash D Ghanate, Dharmeshkumar S Parmar, Ritu Yadav, Riya Uthup, Venkateswarlu Panchagnula, Anu Raghunathan

Open access · goldAbstract read
In one paragraph

Article in NPJ systems biology and applications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  5. Article
  6. Unlocking Glioblastoma Vulnerabilities with CRISPR-Based Genetic Screening.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Selva Rupa Christinal ImmanuelChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.ORCID http://orcid.org/0000-0002-3642-9605
Avinash D GhanateChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.ORCID http://orcid.org/0000-0002-6284-7667
Dharmeshkumar S ParmarChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.
Ritu YadavChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.
Riya UthupChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.
Venkateswarlu PanchagnulaChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India.ORCID http://orcid.org/0000-0001-6441-2598
Anu RaghunathanChemical Engineering Division, CSIR-National Chemical Laboratory, Pune, 411008, India. anu.raghunathan@ncl.res.in.ORCID http://orcid.org/0000-0002-7063-9606
National Chemical Laboratory · INThe Francis Crick Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolic reprogramming and its molecular underpinnings are critical to unravel the duality of cancer cell function and chemo-resistance. Here, we use a constraints-based integrated approach to delineate the interplay between metabolism and epigenetics, hardwired in the genome, to shape temozolomide (TMZ) resistance. Differential metabolism was identified in response to TMZ at varying concentrations in both the resistant neurospheroidal (NSP) and the susceptible (U87MG) glioblastoma cell-lines. The genetic basis of this metabolic adaptation was characterized by whole exome sequencing that identified mutations in signaling pathway regulators of growth and energy metabolism. Remarkably, our integrated approach identified rewiring in glycolysis, TCA cycle, malate aspartate shunt, and oxidative phosphorylation pathways. The differential killing of TMZ resistant NSP by Rotenone at low concentrations with an IC

Indexed as

Antineoplastic Agents, AlkylatingApoptosisCell Line, TumorCell ProliferationCell SurvivalDrug Resistance, NeoplasmGene ExpressionGene Expression Regulation, NeoplasticGeneticsGenetic TechniquesGlioblastomaHumansMetabolomicsSignal TransductionSystems BiologyTemozolomideAntineoplastic Agents, AlkylatingTemozolomide

Identifiers

PMID33420045
PMCPMC7794364
OpenAlexW3119751777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.