Evidence map›Paper›PMID 33419948›Full record

ArticleJournal of clinical microbiology2021

Performance of Saliva Specimens for the Molecular Detection of SARS-CoV-2 in the Community Setting: Does Sample Collection Method Matter?

Marta Fernández-González, Vanesa Agulló, Alba de la Rica, Ana Infante, Mar Carvajal, José Alberto García, Nieves Gonzalo-Jiménez, Claudio Cuartero, Montserrat Ruiz-García, Carlos de Gregorio and 3 more

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
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  13. Review
  14. Accuracy of saliva and nasopharyngeal sampling for detection of SARS-CoV-2 in community screening: a multicentric cohort study.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Marta Fernández-González *Infectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain.ORCID 0000-0001-9949-8504
Vanesa Agulló *Infectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain.ORCID 0000-0002-7036-2184
Alba de la RicaMicrobiology Service, Hospital General Universitario de Elche, Elche, Spain.
Ana InfanteMicrobiology Service, Hospital Universitario de San Juan, San Juan de Alicante, Spain.
Mar CarvajalInfectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain.
José Alberto GarcíaInfectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain.ORCID 0000-0002-1203-7260
Nieves Gonzalo-JiménezMicrobiology Service, Hospital General Universitario de Elche, Elche, Spain.
Claudio CuarteroMicrobiology Service, Hospital Universitario de San Juan, San Juan de Alicante, Spain.
Montserrat Ruiz-GarcíaMicrobiology Service, Hospital General Universitario de Elche, Elche, Spain.
Carlos de GregorioDepartment 20th Health Authority, Consellería de Sanitat, Generalitat Valenciana, Elche, Spain.
Manuel SánchezDepartment 20th Health Authority, Consellería de Sanitat, Generalitat Valenciana, Elche, Spain.
Mar Masiá *Infectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain mmasia@umh.es gutierrez_fel@gva.es.ORCID 0000-0001-9878-2458
Félix Gutiérrez *Infectious Diseases Unit, Hospital General Universitario de Elche, Elche, Spain mmasia@umh.es gutierrez_fel@gva.es.ORCID 0000-0002-9485-6867

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Data on the performance of saliva specimens for diagnosing coronavirus disease 2019 (COVID-19) in ambulatory patients are scarce and inconsistent. We assessed saliva-based specimens for detecting severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by reverse transcriptase PCR (RT-PCR) in the community setting and compared three different collection methods. This prospective study was conducted in three primary care centers. RT-PCR was performed on paired nasopharyngeal swabs (NPS) and saliva samples collected from outpatients with a broad clinical spectrum of illness. To assess differences in collection methods, saliva specimens were obtained in a different way in each of the participating centers: supervised collection (SVC), oropharyngeal washing (OPW), and self-collection (SC). Pairs of NPS and saliva samples from 577 patients (median age, 39 years; 44% men; 42% asymptomatic) were collected and tested, and 120 (20.8%) gave positive results. The overall agreement with NPS results and kappa coefficients (κ) for saliva samples obtained by SVC, OPW, and SC were 95% (κ = 0.85), 93.4% (κ = 0.76), and 93.3% (κ = 0.76), respectively. The sensitivities (95% confidence intervals [95% CI]) of the saliva specimens ranged from 86% (72.6% to 93.7%) for SVC to 66.7% (50.4% to 80%) for SC samples. Sensitivity was higher for samples with lower cycle threshold (

Indexed as

COVID-19SARS-CoV-2AdultFemaleHumansMaleNasopharynxProspective StudiesSalivaSpecimen HandlingCOVID-19diagnosticsPCRsalivaSARS-CoV-2

Identifiers

PMID33419948
PMCPMC8092755

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.