Evidence map›Paper›PMID 33418027›Full record

ArticleVirus research2021

Differential induction of type I and III interferon genes in the upper respiratory tract of patients with coronavirus disease 2019 (COVID-19).

Carolina Scagnolari, Alessandra Pierangeli, Federica Frasca, Camilla Bitossi, Agnese Viscido, Giuseppe Oliveto, Mirko Scordio, Laura Mazzuti, Daniele Di Carlo, Massimo Gentile and 8 more

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Carolina ScagnolariLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy. Electronic address: carolina.scagnolari@uniroma1.it.
Alessandra PierangeliLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Federica FrascaLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Camilla BitossiLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Agnese ViscidoLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Giuseppe OlivetoLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Mirko ScordioLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Laura MazzutiLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Daniele Di CarloLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Massimo GentileLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Angelo SoliminiDepartment of Public Health and Infectious Diseases, Sapienza University, Viale del Policlinico 155, Rome 00185, Italy.
Giancarlo CeccarelliDepartment of Public Health and Infectious Diseases, Sapienza University, Viale del Policlinico 155, Rome 00185, Italy.
Francesco PuglieseDepartment of General and Specialist Surgery "Paride Stefanini", Sapienza University, Viale del Policlinico 155, Rome 00185, Italy.
Claudio Maria MastroianniDepartment of Public Health and Infectious Diseases, Sapienza University, Viale del Policlinico 155, Rome 00185, Italy.
Gabriella d'EttorreDepartment of Public Health and Infectious Diseases, Sapienza University, Viale del Policlinico 155, Rome 00185, Italy.
Ombretta TurrizianiLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy.
Guido AntonelliLaboratory of Virology, Department of Molecular Medicine, Sapienza University, Affiliated to Istituto Pasteur Italia, Rome 00185, Italy; Microbiology and Virology Unit, Hospital "Policlinico Umberto I", Sapienza University, Rome 00185, Italy.
Virology and Infectious Diseases COVID-19 Study Group of Sapienza University
Istituto Pasteur · ITPoliclinico Umberto I · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The natural course of type I and III interferon (IFN) response in the respiratory tract of COVID-19 patients needs to be better defined. We showed that type I/III IFNs, IFN-regulatory factor 7 (IRF7), and IFN stimulated genes (ISGs), are highly expressed in the oropharyngeal cells of SARS-CoV-2 positive patients compared to healthy controls. Notably, the subgroup of critically-ill patients that required invasive mechanical ventilation had a general decrease in expression of IFN/ISG genes. Heterogeneous patterns of IFN-I/III response in the respiratory tract of COVID-19 patients may be associated to COVID-19 severity.

Indexed as

SARS-CoV-2AdultAgedCOVID-19FemaleHumansInterferon LambdaInterferonsInterferon Type IMaleMiddle AgedOropharynxSeverity of Illness IndexInterferon LambdaInterferonsInterferon Type ICOVID-19IFN alpha/betaIFN lambdaInnate immunityISGSARS-CoV-2

Identifiers

PMID33418027
PMCPMC7834390
OpenAlexW3120949491

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.