Evidence map›Paper›PMID 33417540›Full record

ArticleIEEE transactions on medical imaging2021

Spherical Deformable U-Net: Application to Cortical Surface Parcellation and Development Prediction.

Fenqiang Zhao, Zhengwang Wu, Li Wang, Weili Lin, John H Gilmore, Shunren Xia, Dinggang Shen, Gang Li

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
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  5. Unified Brain Surface and Volume Registration.... International Conference on Learning Representations · 2026
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  7. Article
  8. Article
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  10. TAU PET HARMONIZATION VIA SURFACE-BASED DIFFUSION MODEL.Proceedings. IEEE International Symposium on Biomedical Imaging · 2025
    Article
  11. Article
  12. UNSUPERVISED CORTICAL SURFACE REGISTRATION NETWORK FOR ALIGNING GYRALNET.Proceedings. IEEE International Symposium on Biomedical Imaging · 2025
    Article
  13. Article
  14. Article
  15. Longitudinally Consistent Individualized Prediction of Infant Cortical Morphological Development.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2024
    Article
  16. Consecutive-Contrastive Spherical U-Net: Enhancing Reliability of Individualized Functional Brain Parcellation for Short-Duration fMRI Scans.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2024
    Article
  17. Disentangled Hybrid Transformer for Identification of Infants with Prenatal Drug Exposure.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2024
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fenqiang Zhao
Zhengwang Wu
Li Wang
Weili Lin
John H Gilmore
Shunren Xia
Dinggang Shen
Gang Li

Funding

Continued Development of Infant Brain Analysis ToolsR01MH117943 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG, WANG, LI · 2018 to 2022
$2.3M
Parcellating Infant Cerebral Cortex based on Developmental Patterns of Multimodal MRIR01MH116225 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG · 2018 to 2022
$1.9M
4D Cortical Surface Analysis Tools for Study of Early Brain Development in Typical and High-risk InfantsK01MH107815 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG · 2015 to 2018
$559k
NIMH NIH HHS K01 MH107815NIMH NIH HHS R01 MH116225NIMH NIH HHS R01 MH117943
6 · The paper itself

Abstract

Convolutional Neural Networks (CNNs) have achieved overwhelming success in learning-related problems for 2D/3D images in the Euclidean space. However, unlike in the Euclidean space, the shapes of many structures in medical imaging have an inherent spherical topology in a manifold space, e.g., the convoluted brain cortical surfaces represented by triangular meshes. There is no consistent neighborhood definition and thus no straightforward convolution/pooling operations for such cortical surface data. In this paper, leveraging the regular and hierarchical geometric structure of the resampled spherical cortical surfaces, we create the 1-ring filter on spherical cortical triangular meshes and accordingly develop convolution/pooling operations for constructing Spherical U-Net for cortical surface data. However, the regular nature of the 1-ring filter makes it inherently limited to model fixed geometric transformations. To further enhance the transformation modeling capability of Spherical U-Net, we introduce the deformable convolution and deformable pooling to cortical surface data and accordingly propose the Spherical Deformable U-Net (SDU-Net). Specifically, spherical offsets are learned to freely deform the 1-ring filter on the sphere to adaptively localize cortical structures with different sizes and shapes. We then apply the SDU-Net to two challenging and scientifically important tasks in neuroimaging: cortical surface parcellation and cortical attribute map prediction. Both applications validate the competitive performance of our approach in accuracy and computational efficiency in comparison with state-of-the-art methods.

Indexed as

Image Processing, Computer-AssistedNeural Networks, ComputerImaging, Three-Dimensional

Identifiers

PMID33417540
PMCPMC8016713

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.