Evidence map›Paper›PMID 33415608›Full record

ArticlePlant molecular biology2021

Phylogenetic and functional diversity of aldehyde-alcohol dehydrogenases in microalgae.

Robert van Lis, Yohann Couté, Sabine Brugière, Nicolas J Tourasse, Benoist Laurent, Wolfgang Nitschke, Olivier Vallon, Ariane Atteia

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In one paragraph

Article in Plant molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Robert van LisAix Marseille Université, CNRS, BIP UMR 7281, Marseille, France.
Yohann CoutéUniv Grenoble Alpes, CEA, INSERM, IRIG, Grenoble, BGE, France.
Sabine BrugièreUniv Grenoble Alpes, CEA, INSERM, IRIG, Grenoble, BGE, France.
Nicolas J TourasseUMR7141 CNRS-Sorbonne Université, Institut de Biologie Physico-Chimique, Paris, France.
Benoist LaurentFR 550 CNRS, Institut de Biologie Physico-Chimique, Paris, France.
Wolfgang NitschkeAix Marseille Université, CNRS, BIP UMR 7281, Marseille, France.
Olivier VallonUMR7141 CNRS-Sorbonne Université, Institut de Biologie Physico-Chimique, Paris, France.
Ariane AtteiaAix Marseille Université, CNRS, BIP UMR 7281, Marseille, France. ariane.atteia@cnrs.fr.ORCID http://orcid.org/0000-0001-5302-9550
Centre National de la Recherche Scientifique · FRInserm · FR

Funding

Agence Nationale de la Recherche ANR-10-INBS-08-01 ProFI grantAgence Nationale de la Recherche ANR-11-LABX-0011-01
6 · The paper itself

Abstract

key messageThe study shows the biochemical and enzymatic divergence between the two aldehyde-alcohol dehydrogenases of the alga Polytomella sp., shedding light on novel aspects of the enzyme evolution amid unicellular eukaryotes. Aldehyde-alcohol dehydrogenases (ADHEs) are large metalloenzymes that typically perform the two-step reduction of acetyl-CoA into ethanol. These enzymes consist of an N-terminal acetylating aldehyde dehydrogenase domain (ALDH) and a C-terminal alcohol dehydrogenase (ADH) domain. ADHEs are present in various bacterial phyla as well as in some unicellular eukaryotes. Here we focus on ADHEs in microalgae, a diverse and polyphyletic group of plastid-bearing unicellular eukaryotes. Genome survey shows the uneven distribution of the ADHE gene among free-living algae, and the presence of two distinct genes in various species. We show that the non-photosynthetic Chlorophyte alga Polytomella sp. SAG 198.80 harbors two genes for ADHE-like enzymes with divergent C-terminal ADH domains. Immunoblots indicate that both ADHEs accumulate in Polytomella cells growing aerobically on acetate or ethanol. ADHE1 of ~ 105-kDa is found in particulate fractions, whereas ADHE2 of ~ 95-kDa is mostly soluble. The study of the recombinant enzymes revealed that ADHE1 has both the ALDH and ADH activities, while ADHE2 has only the ALDH activity. Phylogeny shows that the divergence occurred close to the root of the Polytomella genus within a clade formed by the majority of the Chlorophyte ADHE sequences, next to the cyanobacterial clade. The potential diversification of function in Polytomella spp. unveiled here likely took place after the loss of photosynthesis. Overall, our study provides a glimpse at the complex evolutionary history of the ADHE in microalgae which includes (i) acquisition via different gene donors, (ii) gene duplication and (iii) independent evolution of one of the two enzymatic domains.

Indexed as

Genetic VariationPhylogenyAlcohol DehydrogenaseAldehyde DehydrogenaseAlgal ProteinsAmino Acid SequenceChlorophytaMass SpectrometryMicroalgaeProteomicsSequence Analysis, DNASequence Homology, Amino AcidAlcohol DehydrogenaseAldehyde DehydrogenaseAlgal ProteinsAlcohol dehydrogenase (ADH)Bifunctional enzymeGene duplicationPolytomellaSpirosome

Identifiers

PMID33415608
OpenAlexW3118470708

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.