Evidence map›Paper›PMID 33414168›Full record

ArticleGut2021

Evaluating the utility of tumour mutational signatures for identifying hereditary colorectal cancer and polyposis syndrome carriers.

Peter Georgeson, Bernard J Pope, Christophe Rosty, Mark Clendenning, Khalid Mahmood, Jihoon E Joo, Romy Walker, Ryan A Hutchinson, Susan Preston, Julia Como and 13 more

Open access · greenAbstract read
In one paragraph

Article in Gut, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
8.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Frequent Detection ofHuman mutation · 2026
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  9. Article
  10. Review
  11. Article
  12. A review on trends in development and translation of omics signatures in cancer.Computational and structural biotechnology journal · 2024
    Review
  13. Review
  14. Adenomas from individuals with pathogenic biallelic variants in themedRxiv : the preprint server for health sciences · 2024
    Article
  15. Article
  16. Article
  17. Pan-Cancer Interrogation ofJCO precision oncology · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Peter GeorgesonDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0002-5096-4735
Bernard J PopeDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Christophe RostyDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Mark ClendenningDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Khalid MahmoodDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Jihoon E JooDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0003-3331-5335
Romy WalkerDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Ryan A HutchinsonDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Susan PrestonDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Julia ComoDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Sharelle JoselandDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia.
Aung Ko WinCentre for Epidemiology and Biostatistics, The University of Melbourne, Melbourne, Victoria, Australia.ORCID 0000-0002-2794-5261
Finlay A MacraeGenetic Medicine and Family Cancer Clinic, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.
John L HopperCentre for Epidemiology and Biostatistics, The University of Melbourne, Melbourne, Victoria, Australia.
Dmitri MouradovPersonalised Oncology Division, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
Peter GibbsPersonalised Oncology Division, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
Oliver M SieberPersonalised Oncology Division, Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
Dylan E O'SullivanDepartment of Oncology, University of Calgary, Calgary, Alberta, Canada.
Darren R BrennerDepartment of Oncology, University of Calgary, Calgary, Alberta, Canada.
Steve GallingerLunenfeld Tanenbaum Research Institute, Mount Sinai Hospital, The University of Toronto, Toronto, Ontario, Canada.
Mark A JenkinsUniversity of Melbourne Centre for Cancer Research, Victorian Comprehensive Cancer Centre, Melbourne, Victoria, Australia.
Ingrid M WinshipGenetic Medicine and Family Cancer Clinic, The Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Daniel D BuchananDepartment of Clinical Pathology, The University of Melbourne, Melbourne, Victoria, Australia daniel.buchanan@unimelb.edu.au.ORCID 0000-0003-2225-6675
The University of Melbourne · AUThe Royal Melbourne Hospital · AUAlberta Health Services · CAOntario Institute for Cancer Research · CAThe University of Queensland · AUUniversity of Calgary · CA

Funding

Data sharing: the Colon Cancer Family Registry CohortU01CA167551 · NCI · UNIVERSITY OF MELBOURNE · PI Daniel David BUCHANAN, Steven Gallinger · 2018 to 2026
$16.8M
ONTARIO REGISTRY FOR STUDIES OF FAMILIAL COLON CANCERU01CA074783 · NCI · CANCER CARE ONTARIO · PI GALLINGER, STEVEN · 1997 to 2008
$12.5M
AUSTRALASIAN COLORECTAL CANCER FAMILY REGISTRYU01CA097735 · NCI · UNIVERSITY OF MELBOURNE · PI HOPPER, JOHN L · 2002 to 2007
$6.9M
The Colon Cancer Family Registry: AustralasiaU24CA097735 · NCI · UNIVERSITY OF MELBOURNE · PI HOPPER, JOHN L · 2008 to 2011
$6.2M
The Colon Cancer Family Registry: OntarioU24CA074783 · NCI · CANCER CARE ONTARIO · PI GALLINGER, STEVEN · 2008 to 2011
$4.1M
NCI NIH HHS U01 CA074783NCI NIH HHS U01 CA097735NCI NIH HHS U01 CA167551NCI NIH HHS U24 CA074783NCI NIH HHS U24 CA097735
6 · The paper itself

Abstract

objectiveGermline pathogenic variants (PVs) in the DNA mismatch repair (MMR) genes and in the base excision repair gene

designWhole-exome sequencing of formalin-fixed paraffin-embedded (FFPE) CRC tissue was performed on 33 MMR germline PV carriers, 12 biallelic

resultsThe combination of mutational signatures SBS18 and SBS36 contributing >30% of a CRC's signature profile was able to discriminate biallelic

conclusionAssessment of SBS and ID signatures can discriminate CRCs from biallelic

Indexed as

DNA GlycosylasesGerm-Line MutationMutL Protein Homolog 1Adenomatous Polyposis ColiColorectal NeoplasmsDNA Mismatch RepairExome SequencingFemaleGenetic Predisposition to DiseaseHeterozygoteHumansMaleMiddle AgedSyndromeDNA GlycosylasesMLH1 protein, humanMutL Protein Homolog 1mutY adenine glycosylasecolorectal cancercolorectal cancer screeningmolecular pathologymutationstumour markers

Identifiers

PMID33414168
PMCPMC8260632
OpenAlexW3119814152

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.