Evidence map›Paper›PMID 33412757›Full record

ArticleGenomics & informatics2020

An information-theoretical analysis of gene nucleotide sequence structuredness for a selection of aging and cancer-related genes.

David Blokh, Joseph Gitarts, Ilia Stambler

Open access · diamondAbstract read
In one paragraph

Article in Genomics & informatics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

David BlokhC.D. Technologies Ltd., Beer Sheba 8445914, Israel.
Joseph GitartsEfi Arazi School of Computer Science, Interdisciplinary Center, Herzliya 4673304, Israel.
Ilia StamblerDepartment of Science, Technology and Society, Bar Ilan University, Ramat Gan 5290002, Israel.
Bar-Ilan University · ILReichman University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We provide an algorithm for the construction and analysis of autocorrelation (information) functions of gene nucleotide sequences. As a measure of correlation between discrete random variables, we use normalized mutual information. The information functions are indicative of the degree of structuredness of gene sequences. We construct the information functions for selected gene sequences. We find a significant difference between information functions of genes of different types. We hypothesize that the features of information functions of gene nucleotide sequences are related to phenotypes of these genes.

Indexed as

: gene sequencegene structurednessinformation functioninformation theorynormalized mutual information

Identifiers

PMID33412757
PMCPMC7808870
OpenAlexW3118173518

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.