Evidence map›Paper›PMID 33410562›Full record

ArticleHuman mutation2021

Functional characterization of ABCC8 variants of unknown significance based on bioinformatics predictions, splicing assays, and protein analyses: Benefits for the accurate diagnosis of congenital hyperinsulinism.

Cécile Saint-Martin, Marine Cauchois-Le Mière, Emily Rex, Omar Soukarieh, Jean-Baptiste Arnoux, Julien Buratti, Delphine Bouvet, Thierry Frébourg, Pascaline Gaildrat, Show-Ling Shyng and 2 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Digenic HNF1A and ABCC8 variants provide mechanistic insight into early-onset diabetes.The Journal of clinical endocrinology and metabolism · 2026
    Article
  2. Bayliss-Starling Prize Lecture: KThe Journal of physiology · 2025
    Article
  3. Article
  4. The Changing Landscape of Neonatal Diabetes Mellitus in Italy Between 2003 and 2022.The Journal of clinical endocrinology and metabolism · 2024
    Article
  5. Neonatal hyperinsulinism with anWorld journal of clinical cases · 2023
    Article
  6. Personalized Therapeutics for KAnnual review of pharmacology and toxicology · 2023
    Review
  7. KFrontiers in endocrinology · 2023
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Cécile Saint-MartinDepartment of Genetics, AP-HP Pitié-Salpêtrière Hospital, Sorbonne University, Paris, France.ORCID 0000-0002-9534-0969
Marine Cauchois-Le MièreInserm U1245, UFR de Médecine et Pharmacie, UNIROUEN, Normandie University, Normandy Centre for Genomic and Personalized Medicine, Rouen, France.
Emily RexDepartment of Chemical Physiology and Biochemistry, Oregon Health & Science University, Portland, OR, USA.
Omar SoukariehInserm U1245, UFR de Médecine et Pharmacie, UNIROUEN, Normandie University, Normandy Centre for Genomic and Personalized Medicine, Rouen, France.ORCID 0000-0003-4923-4353
Jean-Baptiste ArnouxDepartment of Inherited Metabolic Disease, Necker-Enfants Malades University Hospital, AP-HP, Paris, France.
Julien BurattiDepartment of Genetics, AP-HP Pitié-Salpêtrière Hospital, Sorbonne University, Paris, France.ORCID 0000-0002-0901-0905
Delphine BouvetDepartment of Genetics, AP-HP Pitié-Salpêtrière Hospital, Sorbonne University, Paris, France.
Thierry FrébourgInserm U1245, UFR de Médecine et Pharmacie, UNIROUEN, Normandie University, Normandy Centre for Genomic and Personalized Medicine, Rouen, France.
Pascaline GaildratInserm U1245, UFR de Médecine et Pharmacie, UNIROUEN, Normandie University, Normandy Centre for Genomic and Personalized Medicine, Rouen, France.ORCID 0000-0002-6388-7628
Show-Ling ShyngDepartment of Chemical Physiology and Biochemistry, Oregon Health & Science University, Portland, OR, USA.ORCID 0000-0002-8230-8820
Christine Bellanné-ChantelotDepartment of Genetics, AP-HP Pitié-Salpêtrière Hospital, Sorbonne University, Paris, France.ORCID 0000-0001-8415-6771
Alexandra MartinsInserm U1245, UFR de Médecine et Pharmacie, UNIROUEN, Normandie University, Normandy Centre for Genomic and Personalized Medicine, Rouen, France.ORCID 0000-0003-4322-8497
Inserm · FRSorbonne Université · FROregon Health & Science University · USHôpital Necker-Enfants Malades · FR

Funding

KATP channels and insulin secretionR01DK057699 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI SHYNG, SHOW-LING · 2001 to 2019
$6.1M
Structural Basis of KATP Channel GatingR01DK066485 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI SHYNG, SHOW-LING · 2006 to 2024
$5.8M
NIDDK NIH HHS R01 DK057699NIDDK NIH HHS R01 DK066485
6 · The paper itself

Abstract

ABCC8 encodes the SUR1 subunit of the β-cell ATP-sensitive potassium channel whose loss of function causes congenital hyperinsulinism (CHI). Molecular diagnosis is critical for optimal management of CHI patients. Unfortunately, assessing the impact of ABCC8 variants on RNA splicing remains very challenging as this gene is poorly expressed in leukocytes. Here, we performed bioinformatics analysis and cell-based minigene assays to assess the impact on splicing of 13 ABCC8 variants identified in 20 CHI patients. Next, channel properties of SUR1 proteins expected to originate from minigene-detected in-frame splicing defects were analyzed after ectopic expression in COSm6 cells. Out of the analyzed variants, seven induced out-of-frame splicing defects and were therefore classified as recessive pathogenic, whereas two led to skipping of in-frame exons. Channel functional analysis of the latter demonstrated their pathogenicity. Interestingly, the common rs757110 SNP increased exon skipping in our system suggesting that it may act as a disease modifier factor. Our strategy allowed determining the pathogenicity of all selected ABCC8 variants, and CHI-inheritance pattern for 16 out of the 20 patients. This study highlights the value of combining RNA and protein functional approaches in variant interpretation and reveals the minigene splicing assay as a new tool for CHI molecular diagnostics.

Indexed as

Computational BiologyCongenital HyperinsulinismSulfonylurea ReceptorsExonsHumansRNA SplicingABCC8 protein, humanSulfonylurea ReceptorsABCC8congenital hyperinsulinismin silico predictionsKATP channel SUR1 subunitminigene splicing assaysvariants of unknown significance

Identifiers

PMID33410562
PMCPMC8049974
OpenAlexW3120017741

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.